Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 PENK-208ENST00000523051 772 ntTSL 5 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 AL049840.3-201ENST00000602669 611 ntBASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 KATNBL1P6-202ENST00000562413 1466 ntBASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
KRTAP4-1Q9BYQ7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 SAPCD2P3-201ENST00000455031 850 ntBASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 ABR-217ENST00000572441 563 ntTSL 4 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 BNIP3P18-201ENST00000593976 575 ntBASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 LINC01711-201ENST00000598340 967 ntBASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 Z69720.1-201ENST00000601483 472 ntBASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 KRT8P7-201ENST00000533003 1432 ntBASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-1Q9BYQ7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 IRX1P1-201ENST00000438849 1838 ntBASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC099343.3-201ENST00000605834 2503 ntBASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms