Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ANO7L1-203ENST00000602586 1720 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AC067930.6-201ENST00000623257 4947 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 UNC93B3-201ENST00000308076 687 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AC027682.1-201ENST00000562846 899 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SLC7A5P1-201ENST00000568957 537 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 TPRG1LP1-201ENST00000598702 760 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AP001160.3-201ENST00000601484 763 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AL354811.1-201ENST00000610286 706 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 GNAS-203ENST00000306120 1878 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ESPNP-201ENST00000270691 2015 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms