Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 LINC00167-201ENST00000530583 1419 ntBASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 AC008556.1-201ENST00000610908 2040 ntBASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 AIRN-201ENST00000601203 4374 ntBASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 MRPL3P1-201ENST00000400109 1033 ntBASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 KRT16P4-201ENST00000453883 522 ntBASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 AC099336.1-202ENST00000602961 463 ntBASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 AL390719.2-201ENST00000606993 987 ntBASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 AC233702.3-201ENST00000578656 1387 ntBASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 RCC2P3-201ENST00000418112 1537 ntBASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRNP40Q96DI7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 Z69720.1-201ENST00000601483 472 ntBASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 HOXB1-202ENST00000577092 1414 ntBASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SNRNP40Q96DI7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.83■□□□□ 0.29
SNRNP40Q96DI7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 LINC01006-201ENST00000333319 2292 ntBASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 TCF3P1-201ENST00000423021 1937 ntBASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRNP40Q96DI7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms