Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 AL355385.1-201ENST00000606123 409 ntBASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 AL139424.1-201ENST00000607572 797 ntBASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 AC116407.3-201ENST00000623905 1129 ntBASIC20.33■□□□□ 0.85
TRIM43Q96BQ3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM43Q96BQ3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM43Q96BQ3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM43Q96BQ3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM43Q96BQ3 AC006333.2-201ENST00000607957 2099 ntBASIC20.33■□□□□ 0.84
TRIM43Q96BQ3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM43Q96BQ3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 AC096582.2-201ENST00000510860 516 ntBASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 AC114341.1-201ENST00000618070 349 ntBASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM43Q96BQ3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM43Q96BQ3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 AC034236.2-201ENST00000606662 1610 ntBASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM43Q96BQ3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms