Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD6Q8TD26 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.86■□□□□ 0.29
CHD6Q8TD26 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD6Q8TD26 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD6Q8TD26 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 KRT18P27-201ENST00000427733 1299 ntBASIC16.85■□□□□ 0.29
CHD6Q8TD26 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 AC093520.2-201ENST00000561830 333 ntBASIC16.85■□□□□ 0.29
CHD6Q8TD26 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD6Q8TD26 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD6Q8TD26 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 AC064836.3-201ENST00000607928 673 ntBASIC16.84■□□□□ 0.29
CHD6Q8TD26 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 RPS2P32-201ENST00000439199 892 ntBASIC16.84■□□□□ 0.29
CHD6Q8TD26 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHD6Q8TD26 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD6Q8TD26 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHD6Q8TD26 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CHD6Q8TD26 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CHD6Q8TD26 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.83■□□□□ 0.29
CHD6Q8TD26 AL139288.1-201ENST00000623748 933 ntBASIC16.83■□□□□ 0.29
CHD6Q8TD26 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.83■□□□□ 0.29
CHD6Q8TD26 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.83■□□□□ 0.29
CHD6Q8TD26 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHD6Q8TD26 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CHD6Q8TD26 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHD6Q8TD26 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.83■□□□□ 0.29
CHD6Q8TD26 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHD6Q8TD26 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHD6Q8TD26 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD6Q8TD26 RCN1P2-201ENST00000398357 915 ntBASIC16.83■□□□□ 0.28
CHD6Q8TD26 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 ABCD1P5-201ENST00000445663 754 ntBASIC16.83■□□□□ 0.28
CHD6Q8TD26 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 AC015911.4-201ENST00000588022 1070 ntBASIC16.83■□□□□ 0.28
CHD6Q8TD26 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 C1orf229-201ENST00000623686 2258 ntBASIC16.83■□□□□ 0.28
CHD6Q8TD26 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHD6Q8TD26 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHD6Q8TD26 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD6Q8TD26 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD6Q8TD26 AC010336.2-201ENST00000564226 506 ntBASIC16.83■□□□□ 0.28
CHD6Q8TD26 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD6Q8TD26 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD6Q8TD26 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD6Q8TD26 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD6Q8TD26 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD6Q8TD26 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD6Q8TD26 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms