Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 AC132008.2-207ENST00000454517 770 ntBASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 AC113404.2-201ENST00000507884 177 ntBASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 AL512353.2-201ENST00000448759 1962 ntBASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RGPD4Q7Z3J3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 AC211486.1-202ENST00000416371 468 ntBASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 AC211476.1-201ENST00000503899 468 ntBASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 AC025062.2-201ENST00000605477 670 ntBASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 AL138831.2-201ENST00000606564 490 ntBASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RGPD4Q7Z3J3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RGPD4Q7Z3J3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 YBX1P5-201ENST00000509441 847 ntBASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 AP005117.1-201ENST00000584346 1413 ntBASIC23.72■■□□□ 1.39
RGPD4Q7Z3J3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 INTS4P1-201ENST00000438455 1935 ntBASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 SPCS2P1-201ENST00000561636 679 ntBASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RGPD4Q7Z3J3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RGPD4Q7Z3J3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 AC254562.1-201ENST00000417586 456 ntBASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RGPD4Q7Z3J3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms