Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 AC006011.2-201ENST00000621313 1158 ntBASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD3Q6PCD5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 FEM1AP3-201ENST00000403722 1741 ntBASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFWD3Q6PCD5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RFWD3Q6PCD5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFWD3Q6PCD5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 AL049812.1-201ENST00000432563 2267 ntBASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFWD3Q6PCD5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 GPAT2P1-201ENST00000444924 1672 ntBASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 AL049597.2-201ENST00000565575 961 ntBASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 AC141257.4-201ENST00000634557 245 ntBASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 AC136944.6-201ENST00000634818 245 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms