Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 AKR1C7P-201ENST00000305623 895 ntBASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 NUS1P2-201ENST00000417358 873 ntBASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 AC064862.7-201ENST00000604520 867 ntBASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 BX640515.1-201ENST00000617215 977 ntBASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 NSUN5P1-202ENST00000421140 1535 ntBASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 NSUN5P2-203ENST00000457352 1529 ntBASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 AL590627.1-203ENST00000421194 1026 ntBASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TSPY12P-201ENST00000421279 868 ntBASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 AC006333.2-201ENST00000607957 2099 ntBASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD4Q5XG99 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 AL137060.1-201ENST00000618151 2648 ntBASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 REXO1L6P-202ENST00000619970 1078 ntBASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 TEX21P-204ENST00000641479 1693 ntBASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD4Q5XG99 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 KRT8P32-201ENST00000512863 1461 ntBASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 MINOS1P3-201ENST00000457048 203 ntBASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 RN7SL606P-201ENST00000472779 293 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms