Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.31■□□□□ 0.84
PRPF38BQ5VTL8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PRPF38BQ5VTL8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 HEIH-201ENST00000623091 1652 ntBASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 AL139400.1-201ENST00000366220 510 ntBASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 TERF1P3-201ENST00000505638 1227 ntBASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRPF38BQ5VTL8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 ELK2BP-201ENST00000415014 1224 ntBASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 CEND1P1-201ENST00000451006 455 ntBASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 AC025062.2-201ENST00000605477 670 ntBASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 AL353692.3-201ENST00000407031 1396 ntBASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRPF38BQ5VTL8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 CLDN5-201ENST00000403084 2357 ntBASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 AC010240.3-201ENST00000607688 395 ntBASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 AP002414.3-201ENST00000589352 1468 ntBASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.28■□□□□ 0.84
PRPF38BQ5VTL8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 GUSBP5-202ENST00000510805 1989 ntBASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 MRPL20P1-201ENST00000400819 433 ntBASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 SLC25A6P5-201ENST00000435663 894 ntBASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPF38BQ5VTL8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRPF38BQ5VTL8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms