Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 TSPY22P-201ENST00000427496 604 ntBASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM1Q2M3G4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 KRT8P26-201ENST00000534154 1276 ntBASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM1Q2M3G4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 MIR3652-201ENST00000579335 131 ntBASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM1Q2M3G4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 Z83836.1-201ENST00000624605 1642 ntBASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 AC246785.2-201ENST00000432512 513 ntBASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHROOM1Q2M3G4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms