Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RASGEF1BQ0VAM2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RASGEF1BQ0VAM2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RASGEF1BQ0VAM2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RASGEF1BQ0VAM2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RASGEF1BQ0VAM2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RASGEF1BQ0VAM2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RASGEF1BQ0VAM2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 AL390955.1-201ENST00000428694 934 ntBASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 MFAP1P1-201ENST00000442257 1255 ntBASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 PRSS44-201ENST00000515154 1146 ntBASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 FITM1-202ENST00000559294 800 ntBASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 AC073912.3-201ENST00000624414 853 ntBASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 KRT8P11-201ENST00000409686 1436 ntBASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 TEX21P-204ENST00000641479 1693 ntBASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.04■□□□□ 0.32
RASGEF1BQ0VAM2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 AC096733.2-201ENST00000609937 1394 ntBASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 AP005242.2-201ENST00000580065 1175 ntBASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RASGEF1BQ0VAM2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 OR6D1P-202ENST00000641007 5290 ntBASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 TSPY23P-201ENST00000440136 739 ntBASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 CKBP1-201ENST00000565489 1086 ntBASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RASGEF1BQ0VAM2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RASGEF1BQ0VAM2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RASGEF1BQ0VAM2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RASGEF1BQ0VAM2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
RASGEF1BQ0VAM2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.02■□□□□ 0.31
RASGEF1BQ0VAM2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RASGEF1BQ0VAM2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RASGEF1BQ0VAM2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms