Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
SRP54P61011 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
SRP54P61011 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.48■□□□□ 0.55
SRP54P61011 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.48■□□□□ 0.55
SRP54P61011 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SRP54P61011 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SRP54P61011 AC024243.1-201ENST00000609234 778 ntBASIC18.48■□□□□ 0.55
SRP54P61011 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.48■□□□□ 0.55
SRP54P61011 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SRP54P61011 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SRP54P61011 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SRP54P61011 RCC2P3-201ENST00000418112 1537 ntBASIC18.48■□□□□ 0.55
SRP54P61011 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SRP54P61011 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.47■□□□□ 0.55
SRP54P61011 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SRP54P61011 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.47■□□□□ 0.55
SRP54P61011 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.47■□□□□ 0.55
SRP54P61011 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.47■□□□□ 0.55
SRP54P61011 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 SPDYE15P-201ENST00000424157 909 ntBASIC18.47■□□□□ 0.55
SRP54P61011 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.47■□□□□ 0.55
SRP54P61011 AC034232.1-201ENST00000506026 1064 ntBASIC18.47■□□□□ 0.55
SRP54P61011 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.47■□□□□ 0.55
SRP54P61011 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.47■□□□□ 0.55
SRP54P61011 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.47■□□□□ 0.55
SRP54P61011 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SRP54P61011 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.47■□□□□ 0.55
SRP54P61011 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.47■□□□□ 0.55
SRP54P61011 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.47■□□□□ 0.55
SRP54P61011 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.46■□□□□ 0.55
SRP54P61011 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SRP54P61011 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.46■□□□□ 0.55
SRP54P61011 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SRP54P61011 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
SRP54P61011 HYMAI.1-201ENST00000620949 238 ntBASIC18.46■□□□□ 0.55
SRP54P61011 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.46■□□□□ 0.55
SRP54P61011 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.46■□□□□ 0.55
SRP54P61011 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 AL109659.2-201ENST00000606809 1674 ntBASIC18.46■□□□□ 0.55
SRP54P61011 LINC01311-201ENST00000565162 1445 ntBASIC18.46■□□□□ 0.55
SRP54P61011 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.46■□□□□ 0.55
SRP54P61011 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP54P61011 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
SRP54P61011 FP475955.4-201ENST00000623131 1990 ntBASIC18.46■□□□□ 0.55
SRP54P61011 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP54P61011 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.45■□□□□ 0.54
SRP54P61011 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP54P61011 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.45■□□□□ 0.54
SRP54P61011 IER3-202ENST00000376377 1350 ntBASIC18.45■□□□□ 0.54
SRP54P61011 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.45■□□□□ 0.54
SRP54P61011 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP54P61011 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SRP54P61011 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms