Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.13■□□□□ 0.97
CENPFP49454 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CENPFP49454 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.13■□□□□ 0.97
CENPFP49454 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 AC096582.2-201ENST00000510860 516 ntBASIC21.13■□□□□ 0.97
CENPFP49454 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.13■□□□□ 0.97
CENPFP49454 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.13■□□□□ 0.97
CENPFP49454 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CENPFP49454 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.13■□□□□ 0.97
CENPFP49454 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.13■□□□□ 0.97
CENPFP49454 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.13■□□□□ 0.97
CENPFP49454 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 KRT18P23-201ENST00000435622 1283 ntBASIC21.13■□□□□ 0.97
CENPFP49454 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.13■□□□□ 0.97
CENPFP49454 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.13■□□□□ 0.97
CENPFP49454 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.13■□□□□ 0.97
CENPFP49454 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CENPFP49454 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CENPFP49454 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.13■□□□□ 0.97
CENPFP49454 AC104109.2-201ENST00000602919 1418 ntBASIC21.12■□□□□ 0.97
CENPFP49454 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.12■□□□□ 0.97
CENPFP49454 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CENPFP49454 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.12■□□□□ 0.97
CENPFP49454 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPFP49454 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPFP49454 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPFP49454 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.12■□□□□ 0.97
CENPFP49454 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CENPFP49454 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPFP49454 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPFP49454 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPFP49454 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CENPFP49454 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.12■□□□□ 0.97
CENPFP49454 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.11■□□□□ 0.97
CENPFP49454 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
CENPFP49454 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.11■□□□□ 0.97
CENPFP49454 AC079834.2-201ENST00000609776 1949 ntBASIC21.11■□□□□ 0.97
CENPFP49454 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CENPFP49454 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 AC034105.1-201ENST00000563488 319 ntBASIC21.11■□□□□ 0.97
CENPFP49454 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CENPFP49454 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CENPFP49454 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.1■□□□□ 0.97
CENPFP49454 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.1■□□□□ 0.97
CENPFP49454 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.1■□□□□ 0.97
CENPFP49454 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.1■□□□□ 0.97
CENPFP49454 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.1■□□□□ 0.97
CENPFP49454 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.1■□□□□ 0.97
CENPFP49454 MCCD1P1-208ENST00000445732 328 ntBASIC21.1■□□□□ 0.97
CENPFP49454 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CENPFP49454 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CENPFP49454 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CENPFP49454 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPFP49454 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.1■□□□□ 0.97
CENPFP49454 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.09■□□□□ 0.97
CENPFP49454 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.09■□□□□ 0.97
CENPFP49454 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.09■□□□□ 0.97
CENPFP49454 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.09■□□□□ 0.97
CENPFP49454 SART3-203ENST00000546611 1184 ntBASIC21.09■□□□□ 0.97
CENPFP49454 AC012640.2-201ENST00000561606 901 ntBASIC21.09■□□□□ 0.97
CENPFP49454 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CENPFP49454 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CENPFP49454 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.09■□□□□ 0.97
CENPFP49454 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms