Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN7P35236 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN7P35236 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PTPN7P35236 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN7P35236 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PTPN7P35236 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTPN7P35236 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN7P35236 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN7P35236 FSCN1P1-201ENST00000568912 1481 ntBASIC19.4■□□□□ 0.7
PTPN7P35236 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN7P35236 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN7P35236 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN7P35236 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.39■□□□□ 0.7
PTPN7P35236 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN7P35236 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.39■□□□□ 0.7
PTPN7P35236 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN7P35236 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN7P35236 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN7P35236 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN7P35236 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PTPN7P35236 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
PTPN7P35236 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN7P35236 AC096733.2-201ENST00000609937 1394 ntBASIC19.39■□□□□ 0.69
PTPN7P35236 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN7P35236 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN7P35236 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN7P35236 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN7P35236 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTPN7P35236 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN7P35236 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN7P35236 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTPN7P35236 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN7P35236 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTPN7P35236 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PTPN7P35236 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN7P35236 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN7P35236 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.38■□□□□ 0.69
PTPN7P35236 AL135905.2-201ENST00000584934 1404 ntBASIC19.38■□□□□ 0.69
PTPN7P35236 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN7P35236 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN7P35236 ITM2C-210ENST00000620962 501 ntBASIC19.38■□□□□ 0.69
PTPN7P35236 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN7P35236 AC007613.1-201ENST00000572811 2597 ntBASIC19.38■□□□□ 0.69
PTPN7P35236 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PTPN7P35236 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN7P35236 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN7P35236 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN7P35236 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPN7P35236 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN7P35236 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN7P35236 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN7P35236 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.37■□□□□ 0.69
PTPN7P35236 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN7P35236 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN7P35236 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PTPN7P35236 DGCR10-201ENST00000609839 495 ntBASIC19.37■□□□□ 0.69
PTPN7P35236 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN7P35236 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN7P35236 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTPN7P35236 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PTPN7P35236 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN7P35236 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN7P35236 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN7P35236 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN7P35236 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN7P35236 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN7P35236 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PTPN7P35236 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN7P35236 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTPN7P35236 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN7P35236 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms