Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.42■□□□□ 0.54
VARSP26640 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
VARSP26640 FAM197Y1-201ENST00000421178 764 ntBASIC18.42■□□□□ 0.54
VARSP26640 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VARSP26640 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.42■□□□□ 0.54
VARSP26640 AL355075.4-201ENST00000554988 638 ntBASIC18.42■□□□□ 0.54
VARSP26640 AC026471.5-201ENST00000615068 467 ntBASIC18.42■□□□□ 0.54
VARSP26640 AL590326.2-201ENST00000625139 305 ntBASIC18.42■□□□□ 0.54
VARSP26640 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.42■□□□□ 0.54
VARSP26640 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
VARSP26640 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VARSP26640 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
VARSP26640 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.42■□□□□ 0.54
VARSP26640 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.42■□□□□ 0.54
VARSP26640 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.42■□□□□ 0.54
VARSP26640 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VARSP26640 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
VARSP26640 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VARSP26640 MMP23A-201ENST00000234610 1017 ntBASIC18.41■□□□□ 0.54
VARSP26640 TMPOP1-202ENST00000424642 1267 ntBASIC18.41■□□□□ 0.54
VARSP26640 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VARSP26640 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.41■□□□□ 0.54
VARSP26640 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.41■□□□□ 0.54
VARSP26640 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
VARSP26640 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VARSP26640 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VARSP26640 AC138932.1-201ENST00000534164 6830 ntBASIC18.4■□□□□ 0.54
VARSP26640 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.4■□□□□ 0.54
VARSP26640 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.4■□□□□ 0.54
VARSP26640 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
VARSP26640 RCC2P6-201ENST00000526625 1557 ntBASIC18.4■□□□□ 0.54
VARSP26640 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
VARSP26640 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
VARSP26640 RCN1P1-201ENST00000400413 996 ntBASIC18.4■□□□□ 0.54
VARSP26640 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.4■□□□□ 0.54
VARSP26640 TSPY21P-201ENST00000433481 731 ntBASIC18.4■□□□□ 0.54
VARSP26640 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.4■□□□□ 0.54
VARSP26640 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.4■□□□□ 0.54
VARSP26640 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.4■□□□□ 0.54
VARSP26640 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
VARSP26640 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.4■□□□□ 0.54
VARSP26640 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
VARSP26640 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VARSP26640 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
VARSP26640 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.4■□□□□ 0.54
VARSP26640 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
VARSP26640 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VARSP26640 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
VARSP26640 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms