Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ACKR3P25106 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
ACKR3P25106 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ACKR3P25106 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.3■□□□□ 0.2
ACKR3P25106 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACKR3P25106 ANO7L1-203ENST00000602586 1720 ntBASIC16.3■□□□□ 0.2
ACKR3P25106 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACKR3P25106 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.3■□□□□ 0.2
ACKR3P25106 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ACKR3P25106 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ACKR3P25106 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ACKR3P25106 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ACKR3P25106 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
ACKR3P25106 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.29■□□□□ 0.2
ACKR3P25106 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.29■□□□□ 0.2
ACKR3P25106 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
ACKR3P25106 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ACKR3P25106 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ACKR3P25106 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.29■□□□□ 0.2
ACKR3P25106 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.29■□□□□ 0.2
ACKR3P25106 PRSS44-201ENST00000515154 1146 ntBASIC16.29■□□□□ 0.2
ACKR3P25106 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.29■□□□□ 0.2
ACKR3P25106 AC026271.3-201ENST00000571884 352 ntBASIC16.29■□□□□ 0.2
ACKR3P25106 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.29■□□□□ 0.2
ACKR3P25106 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.29■□□□□ 0.2
ACKR3P25106 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.29■□□□□ 0.2
ACKR3P25106 AL031985.4-201ENST00000642138 673 ntBASIC16.29■□□□□ 0.2
ACKR3P25106 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.29■□□□□ 0.2
ACKR3P25106 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.29■□□□□ 0.2
ACKR3P25106 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACKR3P25106 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.28■□□□□ 0.2
ACKR3P25106 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 AC011506.1-201ENST00000474329 610 ntBASIC16.28■□□□□ 0.2
ACKR3P25106 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.28■□□□□ 0.2
ACKR3P25106 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.28■□□□□ 0.2
ACKR3P25106 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.28■□□□□ 0.2
ACKR3P25106 AC011298.2-201ENST00000617989 482 ntBASIC16.28■□□□□ 0.2
ACKR3P25106 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ACKR3P25106 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ACKR3P25106 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.28■□□□□ 0.2
ACKR3P25106 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 AC020916.1-201ENST00000587762 1774 ntBASIC16.28■□□□□ 0.2
ACKR3P25106 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ACKR3P25106 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ACKR3P25106 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACKR3P25106 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ACKR3P25106 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.27■□□□□ 0.2
ACKR3P25106 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
ACKR3P25106 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.27■□□□□ 0.2
ACKR3P25106 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACKR3P25106 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.27■□□□□ 0.2
ACKR3P25106 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
ACKR3P25106 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.27■□□□□ 0.2
ACKR3P25106 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.27■□□□□ 0.2
ACKR3P25106 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms