Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CHRNA1P02708 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.41■□□□□ 0.86
CHRNA1P02708 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNA1P02708 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CHRNA1P02708 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHRNA1P02708 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNA1P02708 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.4■□□□□ 0.86
CHRNA1P02708 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNA1P02708 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA1P02708 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.39■□□□□ 0.86
CHRNA1P02708 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.39■□□□□ 0.86
CHRNA1P02708 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNA1P02708 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNA1P02708 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.39■□□□□ 0.86
CHRNA1P02708 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA1P02708 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRNA1P02708 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA1P02708 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA1P02708 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA1P02708 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRNA1P02708 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRNA1P02708 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRNA1P02708 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.39■□□□□ 0.85
CHRNA1P02708 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.39■□□□□ 0.85
CHRNA1P02708 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHRNA1P02708 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CHRNA1P02708 AC068587.9-201ENST00000641814 219 ntBASIC20.39■□□□□ 0.85
CHRNA1P02708 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA1P02708 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CHRNA1P02708 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA1P02708 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA1P02708 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRNA1P02708 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA1P02708 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA1P02708 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHRNA1P02708 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA1P02708 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA1P02708 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA1P02708 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRNA1P02708 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA1P02708 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
CHRNA1P02708 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRNA1P02708 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRNA1P02708 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA1P02708 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 TSPY19P-201ENST00000418461 509 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 TSPY18P-201ENST00000441642 509 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 LINC00265-3P-201ENST00000447588 903 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 FDX1P1-201ENST00000449115 551 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 AP003733.1-201ENST00000491725 852 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 AP000867.3-201ENST00000524675 377 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 MIR3180-4-201ENST00000582223 153 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 AL390719.2-201ENST00000606993 987 ntBASIC20.38■□□□□ 0.85
CHRNA1P02708 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.38■□□□□ 0.85
CHRNA1P02708 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNA1P02708 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA1P02708 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHRNA1P02708 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNA1P02708 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNA1P02708 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 AC004870.1-201ENST00000315132 882 ntBASIC20.37■□□□□ 0.85
CHRNA1P02708 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.37■□□□□ 0.85
CHRNA1P02708 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHRNA1P02708 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.37■□□□□ 0.85
CHRNA1P02708 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHRNA1P02708 AL732292.2-201ENST00000609649 430 ntBASIC20.37■□□□□ 0.85
CHRNA1P02708 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNA1P02708 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms