Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.59■□□□□ 0.57
SUPT3HO75486 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 AL133373.2-201ENST00000623187 2828 ntBASIC18.59■□□□□ 0.57
SUPT3HO75486 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SUPT3HO75486 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.59■□□□□ 0.57
SUPT3HO75486 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.59■□□□□ 0.57
SUPT3HO75486 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SUPT3HO75486 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.59■□□□□ 0.57
SUPT3HO75486 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 ANO7L1-203ENST00000602586 1720 ntBASIC18.59■□□□□ 0.57
SUPT3HO75486 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.59■□□□□ 0.57
SUPT3HO75486 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SUPT3HO75486 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SUPT3HO75486 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.59■□□□□ 0.57
SUPT3HO75486 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 AC009113.1-201ENST00000570267 2443 ntBASIC18.59■□□□□ 0.57
SUPT3HO75486 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SUPT3HO75486 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SUPT3HO75486 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SUPT3HO75486 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SUPT3HO75486 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SUPT3HO75486 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SUPT3HO75486 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.58■□□□□ 0.57
SUPT3HO75486 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SUPT3HO75486 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SUPT3HO75486 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.58■□□□□ 0.56
SUPT3HO75486 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.58■□□□□ 0.56
SUPT3HO75486 CD99P1-205ENST00000527459 561 ntBASIC18.58■□□□□ 0.56
SUPT3HO75486 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.58■□□□□ 0.56
SUPT3HO75486 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.58■□□□□ 0.56
SUPT3HO75486 AC131212.4-201ENST00000623606 975 ntBASIC18.58■□□□□ 0.56
SUPT3HO75486 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.58■□□□□ 0.56
SUPT3HO75486 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.58■□□□□ 0.56
SUPT3HO75486 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SUPT3HO75486 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SUPT3HO75486 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
SUPT3HO75486 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.58■□□□□ 0.56
SUPT3HO75486 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SUPT3HO75486 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.57■□□□□ 0.56
SUPT3HO75486 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.57■□□□□ 0.56
SUPT3HO75486 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.57■□□□□ 0.56
SUPT3HO75486 AC128676.1-201ENST00000454392 318 ntBASIC18.57■□□□□ 0.56
SUPT3HO75486 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.57■□□□□ 0.56
SUPT3HO75486 AP002982.1-201ENST00000492365 877 ntBASIC18.57■□□□□ 0.56
SUPT3HO75486 C1QBPP2-201ENST00000528754 825 ntBASIC18.57■□□□□ 0.56
SUPT3HO75486 MIR4651-201ENST00000582622 73 ntBASIC18.57■□□□□ 0.56
SUPT3HO75486 AL445675.2-201ENST00000620291 557 ntBASIC18.57■□□□□ 0.56
SUPT3HO75486 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.57■□□□□ 0.56
SUPT3HO75486 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.57■□□□□ 0.56
SUPT3HO75486 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SUPT3HO75486 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SUPT3HO75486 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SUPT3HO75486 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 HTR7P1-201ENST00000538670 1336 ntBASIC18.56■□□□□ 0.56
SUPT3HO75486 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.56■□□□□ 0.56
SUPT3HO75486 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms