Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.69■□□□□ 0.42
URB1O60287 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.69■□□□□ 0.42
URB1O60287 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
URB1O60287 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.69■□□□□ 0.42
URB1O60287 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
URB1O60287 GPAT2P1-201ENST00000444924 1672 ntBASIC17.69■□□□□ 0.42
URB1O60287 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
URB1O60287 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
URB1O60287 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
URB1O60287 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.68■□□□□ 0.42
URB1O60287 Z83836.1-201ENST00000624605 1642 ntBASIC17.68■□□□□ 0.42
URB1O60287 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
URB1O60287 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
URB1O60287 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
URB1O60287 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
URB1O60287 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.68■□□□□ 0.42
URB1O60287 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
URB1O60287 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
URB1O60287 PGAM5P1-201ENST00000518923 814 ntBASIC17.68■□□□□ 0.42
URB1O60287 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.68■□□□□ 0.42
URB1O60287 AC099336.1-202ENST00000602961 463 ntBASIC17.68■□□□□ 0.42
URB1O60287 AC055717.3-201ENST00000622967 595 ntBASIC17.68■□□□□ 0.42
URB1O60287 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
URB1O60287 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
URB1O60287 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
URB1O60287 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 AP001271.2-201ENST00000624018 1556 ntBASIC17.67■□□□□ 0.42
URB1O60287 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 PMS2P2-201ENST00000425039 1128 ntBASIC17.67■□□□□ 0.42
URB1O60287 IGHV3-47-201ENST00000425060 335 ntBASIC17.67■□□□□ 0.42
URB1O60287 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 RPL13AP23-201ENST00000480739 586 ntBASIC17.67■□□□□ 0.42
URB1O60287 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 AC027796.2-201ENST00000575326 344 ntBASIC17.67■□□□□ 0.42
URB1O60287 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.67■□□□□ 0.42
URB1O60287 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
URB1O60287 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
URB1O60287 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
URB1O60287 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
URB1O60287 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
URB1O60287 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.67■□□□□ 0.42
URB1O60287 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
URB1O60287 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.67■□□□□ 0.42
URB1O60287 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.67■□□□□ 0.42
URB1O60287 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
URB1O60287 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
URB1O60287 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
URB1O60287 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
URB1O60287 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.66■□□□□ 0.42
URB1O60287 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms