Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.33■□□□□ 0.53
C4orf47A7E2U8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C4orf47A7E2U8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 AF238378.1-201ENST00000526806 358 ntBASIC18.32■□□□□ 0.52
C4orf47A7E2U8 KRT18P58-201ENST00000527480 1120 ntBASIC18.32■□□□□ 0.52
C4orf47A7E2U8 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.32■□□□□ 0.52
C4orf47A7E2U8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
C4orf47A7E2U8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 AP003733.1-201ENST00000491725 852 ntBASIC18.31■□□□□ 0.52
C4orf47A7E2U8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 REXO1L6P-202ENST00000619970 1078 ntBASIC18.31■□□□□ 0.52
C4orf47A7E2U8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 AL162377.1-201ENST00000618844 1793 ntBASIC18.31■□□□□ 0.52
C4orf47A7E2U8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
C4orf47A7E2U8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 FAM220CP-201ENST00000395253 831 ntBASIC18.3■□□□□ 0.52
C4orf47A7E2U8 IGHV3-47-201ENST00000425060 335 ntBASIC18.3■□□□□ 0.52
C4orf47A7E2U8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 RNA5SP419-201ENST00000515908 135 ntBASIC18.3■□□□□ 0.52
C4orf47A7E2U8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 AL773604.1-201ENST00000617417 272 ntBASIC18.3■□□□□ 0.52
C4orf47A7E2U8 TP73-AS1-207ENST00000624167 988 ntBASIC18.3■□□□□ 0.52
C4orf47A7E2U8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms