Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 AL353692.3-201ENST00000407031 1396 ntBASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC163A0A0D9SF12 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 KRT8P32-201ENST00000512863 1461 ntBASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 KRT18P67-201ENST00000432816 1264 ntBASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 KRT18P58-201ENST00000527480 1120 ntBASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 AC011840.4-201ENST00000578471 627 ntBASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC163A0A0D9SF12 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 NUS1P2-201ENST00000417358 873 ntBASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 FAM197Y8-203ENST00000450145 560 ntBASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 RNPS1P1-201ENST00000507437 918 ntBASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 AP005901.3-202ENST00000581653 237 ntBASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 TP73-AS1-207ENST00000624167 988 ntBASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC163A0A0D9SF12 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC163A0A0D9SF12 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC163A0A0D9SF12 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC163A0A0D9SF12 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC163A0A0D9SF12 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC163A0A0D9SF12 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CCDC163A0A0D9SF12 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 AL391422.3-201ENST00000603791 2761 ntBASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 MINOS1P3-201ENST00000457048 203 ntBASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 AF186996.4-201ENST00000467186 377 ntBASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 AC093909.1-201ENST00000504731 1122 ntBASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 AC099778.1-201ENST00000568593 1911 ntBASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC163A0A0D9SF12 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms