Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rQ99PI8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rQ99PI8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.21■□□□□ 0.83
Rtn4rQ99PI8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rQ99PI8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rQ99PI8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rQ99PI8 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.21■□□□□ 0.83
Rtn4rQ99PI8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn4rQ99PI8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.2■□□□□ 0.82
Rtn4rQ99PI8 Mir3960-201ENSMUST00000198213 73 ntBASIC20.2■□□□□ 0.82
Rtn4rQ99PI8 Gm45364-201ENSMUST00000210883 159 ntBASIC20.2■□□□□ 0.82
Rtn4rQ99PI8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.2■□□□□ 0.82
Rtn4rQ99PI8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.2■□□□□ 0.82
Rtn4rQ99PI8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rQ99PI8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rQ99PI8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rtn4rQ99PI8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rQ99PI8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rQ99PI8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rQ99PI8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rQ99PI8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.18■□□□□ 0.82
Rtn4rQ99PI8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.18■□□□□ 0.82
Rtn4rQ99PI8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.18■□□□□ 0.82
Rtn4rQ99PI8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rQ99PI8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rQ99PI8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rtn4rQ99PI8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.17■□□□□ 0.82
Rtn4rQ99PI8 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.16■□□□□ 0.82
Rtn4rQ99PI8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn4rQ99PI8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rtn4rQ99PI8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn4rQ99PI8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn4rQ99PI8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtn4rQ99PI8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4rQ99PI8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4rQ99PI8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4rQ99PI8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4rQ99PI8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4rQ99PI8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4rQ99PI8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4rQ99PI8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rQ99PI8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rQ99PI8 Gm11175-201ENSMUST00000116172 543 ntBASIC20.13■□□□□ 0.81
Rtn4rQ99PI8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rQ99PI8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rQ99PI8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rtn4rQ99PI8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rQ99PI8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rQ99PI8 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.12■□□□□ 0.81
Rtn4rQ99PI8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rQ99PI8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rtn4rQ99PI8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rQ99PI8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.12■□□□□ 0.81
Rtn4rQ99PI8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4rQ99PI8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rQ99PI8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rQ99PI8 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.1■□□□□ 0.81
Rtn4rQ99PI8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rQ99PI8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rQ99PI8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rQ99PI8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rQ99PI8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rQ99PI8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rQ99PI8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn4rQ99PI8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.08■□□□□ 0.81
Rtn4rQ99PI8 Gm9812-201ENSMUST00000061934 968 ntBASIC20.08■□□□□ 0.81
Rtn4rQ99PI8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn4rQ99PI8 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.08■□□□□ 0.8
Rtn4rQ99PI8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.07■□□□□ 0.8
Rtn4rQ99PI8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn4rQ99PI8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Rtn4rQ99PI8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rQ99PI8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rQ99PI8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rtn4rQ99PI8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rQ99PI8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rQ99PI8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rQ99PI8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.05■□□□□ 0.8
Rtn4rQ99PI8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rQ99PI8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.03■□□□□ 0.8
Rtn4rQ99PI8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rQ99PI8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rQ99PI8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rQ99PI8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 Scarna2-201ENSMUST00000157560 414 ntBASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rQ99PI8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4rQ99PI8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms