Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Zfp131-205ENSMUST00000223812 663 ntBASIC20.45■□□□□ 0.86
Thumpd1Q99J36 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd1Q99J36 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd1Q99J36 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd1Q99J36 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd1Q99J36 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd1Q99J36 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd1Q99J36 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Thumpd1Q99J36 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Thumpd1Q99J36 Gm24970-201ENSMUST00000175582 82 ntBASIC20.43■□□□□ 0.86
Thumpd1Q99J36 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.43■□□□□ 0.86
Thumpd1Q99J36 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.43■□□□□ 0.86
Thumpd1Q99J36 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Thumpd1Q99J36 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd1Q99J36 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd1Q99J36 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd1Q99J36 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.42■□□□□ 0.86
Thumpd1Q99J36 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd1Q99J36 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Thumpd1Q99J36 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Thumpd1Q99J36 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.41■□□□□ 0.86
Thumpd1Q99J36 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd1Q99J36 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd1Q99J36 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Thumpd1Q99J36 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd1Q99J36 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd1Q99J36 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd1Q99J36 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd1Q99J36 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.4■□□□□ 0.86
Thumpd1Q99J36 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.39■□□□□ 0.86
Thumpd1Q99J36 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Thumpd1Q99J36 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.39■□□□□ 0.86
Thumpd1Q99J36 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Thumpd1Q99J36 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Thumpd1Q99J36 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd1Q99J36 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd1Q99J36 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd1Q99J36 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Thumpd1Q99J36 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd1Q99J36 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd1Q99J36 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Thumpd1Q99J36 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Thumpd1Q99J36 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd1Q99J36 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Thumpd1Q99J36 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd1Q99J36 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd1Q99J36 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd1Q99J36 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.35■□□□□ 0.85
Thumpd1Q99J36 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd1Q99J36 Gm9397-201ENSMUST00000200125 605 ntBASIC20.35■□□□□ 0.85
Thumpd1Q99J36 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd1Q99J36 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd1Q99J36 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thumpd1Q99J36 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Thumpd1Q99J36 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Thumpd1Q99J36 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Thumpd1Q99J36 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.33■□□□□ 0.84
Thumpd1Q99J36 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Thumpd1Q99J36 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd1Q99J36 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd1Q99J36 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd1Q99J36 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Thumpd1Q99J36 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd1Q99J36 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.32■□□□□ 0.84
Thumpd1Q99J36 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd1Q99J36 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd1Q99J36 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.31■□□□□ 0.84
Thumpd1Q99J36 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd1Q99J36 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Thumpd1Q99J36 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd1Q99J36 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd1Q99J36 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd1Q99J36 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd1Q99J36 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd1Q99J36 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd1Q99J36 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Thumpd1Q99J36 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Thumpd1Q99J36 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd1Q99J36 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd1Q99J36 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd1Q99J36 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Thumpd1Q99J36 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Thumpd1Q99J36 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd1Q99J36 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd1Q99J36 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd1Q99J36 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd1Q99J36 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Thumpd1Q99J36 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd1Q99J36 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd1Q99J36 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms