Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.19■■□□□ 1.46
Scube3Q66PY1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scube3Q66PY1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.19■■□□□ 1.46
Scube3Q66PY1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.19■■□□□ 1.46
Scube3Q66PY1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Scube3Q66PY1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scube3Q66PY1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Scube3Q66PY1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scube3Q66PY1 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.17■■□□□ 1.46
Scube3Q66PY1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Scube3Q66PY1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scube3Q66PY1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Scube3Q66PY1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.16■■□□□ 1.46
Scube3Q66PY1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Scube3Q66PY1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.15■■□□□ 1.46
Scube3Q66PY1 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.15■■□□□ 1.46
Scube3Q66PY1 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.15■■□□□ 1.46
Scube3Q66PY1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Scube3Q66PY1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
Scube3Q66PY1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scube3Q66PY1 Gm9812-201ENSMUST00000061934 968 ntBASIC24.13■■□□□ 1.45
Scube3Q66PY1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Scube3Q66PY1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scube3Q66PY1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Scube3Q66PY1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.11■■□□□ 1.45
Scube3Q66PY1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Scube3Q66PY1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scube3Q66PY1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scube3Q66PY1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Scube3Q66PY1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scube3Q66PY1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Scube3Q66PY1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
Scube3Q66PY1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.09■■□□□ 1.45
Scube3Q66PY1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Scube3Q66PY1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scube3Q66PY1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scube3Q66PY1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scube3Q66PY1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scube3Q66PY1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scube3Q66PY1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Scube3Q66PY1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Scube3Q66PY1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scube3Q66PY1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scube3Q66PY1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Scube3Q66PY1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.07■■□□□ 1.44
Scube3Q66PY1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scube3Q66PY1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Scube3Q66PY1 Gm11175-201ENSMUST00000116172 543 ntBASIC24.05■■□□□ 1.44
Scube3Q66PY1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.05■■□□□ 1.44
Scube3Q66PY1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Scube3Q66PY1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Scube3Q66PY1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scube3Q66PY1 Scarna2-201ENSMUST00000157560 414 ntBASIC24.03■■□□□ 1.44
Scube3Q66PY1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Scube3Q66PY1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scube3Q66PY1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scube3Q66PY1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Scube3Q66PY1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Scube3Q66PY1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scube3Q66PY1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scube3Q66PY1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scube3Q66PY1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scube3Q66PY1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24■■□□□ 1.43
Scube3Q66PY1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scube3Q66PY1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Scube3Q66PY1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scube3Q66PY1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scube3Q66PY1 Gm16437-201ENSMUST00000025669 507 ntBASIC23.98■■□□□ 1.43
Scube3Q66PY1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Scube3Q66PY1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scube3Q66PY1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Scube3Q66PY1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Scube3Q66PY1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Scube3Q66PY1 Gm9806-201ENSMUST00000051080 552 ntBASIC23.97■■□□□ 1.43
Scube3Q66PY1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Scube3Q66PY1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scube3Q66PY1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scube3Q66PY1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scube3Q66PY1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Scube3Q66PY1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Scube3Q66PY1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scube3Q66PY1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scube3Q66PY1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scube3Q66PY1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scube3Q66PY1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 1281.7 ms