Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Commd3Q63829 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Commd3Q63829 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Commd3Q63829 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Commd3Q63829 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Commd3Q63829 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Commd3Q63829 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Commd3Q63829 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Commd3Q63829 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Commd3Q63829 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Commd3Q63829 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Commd3Q63829 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Commd3Q63829 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Commd3Q63829 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Commd3Q63829 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Commd3Q63829 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Commd3Q63829 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Commd3Q63829 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Commd3Q63829 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Commd3Q63829 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Commd3Q63829 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Commd3Q63829 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Commd3Q63829 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Commd3Q63829 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Commd3Q63829 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Commd3Q63829 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Commd3Q63829 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Commd3Q63829 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Commd3Q63829 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Commd3Q63829 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Commd3Q63829 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Commd3Q63829 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Commd3Q63829 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Commd3Q63829 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Commd3Q63829 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Commd3Q63829 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Commd3Q63829 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Commd3Q63829 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Commd3Q63829 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.03■□□□□ 0.64
Commd3Q63829 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Commd3Q63829 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Commd3Q63829 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Commd3Q63829 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Commd3Q63829 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Commd3Q63829 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Commd3Q63829 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.01■□□□□ 0.63
Commd3Q63829 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Commd3Q63829 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Commd3Q63829 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Commd3Q63829 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Commd3Q63829 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Commd3Q63829 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Commd3Q63829 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Commd3Q63829 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Commd3Q63829 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Commd3Q63829 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Commd3Q63829 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Commd3Q63829 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.99■□□□□ 0.63
Commd3Q63829 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Commd3Q63829 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.98■□□□□ 0.63
Commd3Q63829 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Commd3Q63829 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.98■□□□□ 0.63
Commd3Q63829 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Commd3Q63829 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Commd3Q63829 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Commd3Q63829 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Commd3Q63829 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Commd3Q63829 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Commd3Q63829 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Commd3Q63829 Gm26115-201ENSMUST00000175605 87 ntBASIC18.96■□□□□ 0.63
Commd3Q63829 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Commd3Q63829 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Commd3Q63829 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Commd3Q63829 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Commd3Q63829 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Commd3Q63829 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Commd3Q63829 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Commd3Q63829 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Commd3Q63829 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Commd3Q63829 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Commd3Q63829 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.95■□□□□ 0.62
Commd3Q63829 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Commd3Q63829 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Commd3Q63829 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Commd3Q63829 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Commd3Q63829 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Commd3Q63829 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Commd3Q63829 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms