Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30.72■■■□□ 2.51
Hoxc9P09633 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
Hoxc9P09633 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Hoxc9P09633 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Hoxc9P09633 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Hoxc9P09633 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC30.7■■■□□ 2.51
Hoxc9P09633 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Hoxc9P09633 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.69■■■□□ 2.5
Hoxc9P09633 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.69■■■□□ 2.5
Hoxc9P09633 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC30.69■■■□□ 2.5
Hoxc9P09633 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Hoxc9P09633 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30.68■■■□□ 2.5
Hoxc9P09633 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Hoxc9P09633 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Hoxc9P09633 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Hoxc9P09633 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Hoxc9P09633 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Hoxc9P09633 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Hoxc9P09633 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Hoxc9P09633 AC153911.1-201ENSMUST00000220378 758 ntBASIC30.65■■■□□ 2.5
Hoxc9P09633 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Hoxc9P09633 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Hoxc9P09633 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Hoxc9P09633 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Hoxc9P09633 Amer2-203ENSMUST00000225247 2662 ntBASIC30.64■■■□□ 2.5
Hoxc9P09633 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.49
Hoxc9P09633 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Hoxc9P09633 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Hoxc9P09633 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Hoxc9P09633 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Hoxc9P09633 Terc-201ENSMUST00000082862 423 ntBASIC30.62■■■□□ 2.49
Hoxc9P09633 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Hoxc9P09633 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.61■■■□□ 2.49
Hoxc9P09633 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
Hoxc9P09633 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Hoxc9P09633 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC30.6■■■□□ 2.49
Hoxc9P09633 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.6■■■□□ 2.49
Hoxc9P09633 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Hoxc9P09633 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Hoxc9P09633 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Hoxc9P09633 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hoxc9P09633 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hoxc9P09633 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Hoxc9P09633 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
Hoxc9P09633 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Hoxc9P09633 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Hoxc9P09633 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hoxc9P09633 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Hoxc9P09633 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hoxc9P09633 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.55■■■□□ 2.48
Hoxc9P09633 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.55■■■□□ 2.48
Hoxc9P09633 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hoxc9P09633 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30.54■■■□□ 2.48
Hoxc9P09633 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Hoxc9P09633 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.54■■■□□ 2.48
Hoxc9P09633 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hoxc9P09633 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Hoxc9P09633 Gm5067-201ENSMUST00000170449 1009 ntBASIC30.53■■■□□ 2.48
Hoxc9P09633 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Hoxc9P09633 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Hoxc9P09633 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Hoxc9P09633 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Hoxc9P09633 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Hoxc9P09633 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
Hoxc9P09633 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
Hoxc9P09633 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.51■■■□□ 2.47
Hoxc9P09633 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Hoxc9P09633 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Hoxc9P09633 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hoxc9P09633 Gm10420-201ENSMUST00000121713 882 ntBASIC30.49■■■□□ 2.47
Hoxc9P09633 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Hoxc9P09633 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Hoxc9P09633 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.47■■■□□ 2.47
Hoxc9P09633 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hoxc9P09633 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hoxc9P09633 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hoxc9P09633 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hoxc9P09633 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hoxc9P09633 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Hoxc9P09633 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Hoxc9P09633 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Hoxc9P09633 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30.42■■■□□ 2.46
Hoxc9P09633 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Hoxc9P09633 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
Hoxc9P09633 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC30.41■■■□□ 2.46
Hoxc9P09633 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.4■■■□□ 2.46
Hoxc9P09633 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.4■■■□□ 2.46
Hoxc9P09633 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Hoxc9P09633 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Hoxc9P09633 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30.37■■■□□ 2.45
Hoxc9P09633 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Hoxc9P09633 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Hoxc9P09633 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30.34■■■□□ 2.45
Hoxc9P09633 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Hoxc9P09633 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Hoxc9P09633 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Hoxc9P09633 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Hoxc9P09633 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30.33■■■□□ 2.45
Hoxc9P09633 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Hoxc9P09633 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms