Protein–RNA interactions for Protein: O70584

Nkx2-8, Homeobox protein Nkx-2.8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-8O70584 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-8O70584 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nkx2-8O70584 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Nkx2-8O70584 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-8O70584 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-8O70584 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-8O70584 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-8O70584 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-8O70584 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-8O70584 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-8O70584 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-8O70584 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-8O70584 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-8O70584 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-8O70584 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-8O70584 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-8O70584 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-8O70584 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx2-8O70584 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-8O70584 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nkx2-8O70584 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-8O70584 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-8O70584 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-8O70584 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-8O70584 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-8O70584 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-8O70584 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nkx2-8O70584 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-8O70584 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nkx2-8O70584 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Nkx2-8O70584 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Nkx2-8O70584 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.44■□□□□ 0.54
Nkx2-8O70584 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-8O70584 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nkx2-8O70584 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-8O70584 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-8O70584 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-8O70584 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-8O70584 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-8O70584 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-8O70584 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-8O70584 Gm11599-201ENSMUST00000118720 878 ntBASIC18.41■□□□□ 0.54
Nkx2-8O70584 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.41■□□□□ 0.54
Nkx2-8O70584 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-8O70584 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-8O70584 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-8O70584 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-8O70584 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-8O70584 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-8O70584 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx2-8O70584 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-8O70584 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-8O70584 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-8O70584 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-8O70584 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nkx2-8O70584 Particl-201ENSMUST00000205370 1560 ntBASIC18.38■□□□□ 0.53
Nkx2-8O70584 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-8O70584 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nkx2-8O70584 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.37■□□□□ 0.53
Nkx2-8O70584 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx2-8O70584 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx2-8O70584 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-8O70584 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nkx2-8O70584 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-8O70584 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-8O70584 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.36■□□□□ 0.53
Nkx2-8O70584 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nkx2-8O70584 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-8O70584 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-8O70584 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-8O70584 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-8O70584 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-8O70584 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-8O70584 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-8O70584 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-8O70584 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-8O70584 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-8O70584 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Nkx2-8O70584 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-8O70584 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-8O70584 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-8O70584 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-8O70584 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nkx2-8O70584 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms