Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv1-88A0A140T8N1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv1-88A0A140T8N1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.07■□□□□ 0
Igkv1-88A0A140T8N1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv1-88A0A140T8N1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv1-88A0A140T8N1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv1-88A0A140T8N1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.07■□□□□ 0
Igkv1-88A0A140T8N1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv1-88A0A140T8N1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.05■□□□□ -0
Igkv1-88A0A140T8N1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.05■□□□□ -0
Igkv1-88A0A140T8N1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.05■□□□□ -0
Igkv1-88A0A140T8N1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.05■□□□□ -0
Igkv1-88A0A140T8N1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Igkv1-88A0A140T8N1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv1-88A0A140T8N1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv1-88A0A140T8N1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Igkv1-88A0A140T8N1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv1-88A0A140T8N1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.02■□□□□ -0
Igkv1-88A0A140T8N1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Igkv1-88A0A140T8N1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Igkv1-88A0A140T8N1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Igkv1-88A0A140T8N1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Igkv1-88A0A140T8N1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Igkv1-88A0A140T8N1 Zfp131-205ENSMUST00000223812 663 ntBASIC15.02■□□□□ -0
Igkv1-88A0A140T8N1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv1-88A0A140T8N1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv1-88A0A140T8N1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv1-88A0A140T8N1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv1-88A0A140T8N1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv1-88A0A140T8N1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv1-88A0A140T8N1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Igkv1-88A0A140T8N1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.01□□□□□ -0.01
Igkv1-88A0A140T8N1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.01□□□□□ -0.01
Igkv1-88A0A140T8N1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igkv1-88A0A140T8N1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv1-88A0A140T8N1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv1-88A0A140T8N1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv1-88A0A140T8N1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.99□□□□□ -0.01
Igkv1-88A0A140T8N1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Igkv1-88A0A140T8N1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv1-88A0A140T8N1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv1-88A0A140T8N1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv1-88A0A140T8N1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv1-88A0A140T8N1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv1-88A0A140T8N1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv1-88A0A140T8N1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Igkv1-88A0A140T8N1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv1-88A0A140T8N1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Igkv1-88A0A140T8N1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Igkv1-88A0A140T8N1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Igkv1-88A0A140T8N1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Igkv1-88A0A140T8N1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Igkv1-88A0A140T8N1 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.96□□□□□ -0.01
Igkv1-88A0A140T8N1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.96□□□□□ -0.01
Igkv1-88A0A140T8N1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.96□□□□□ -0.02
Igkv1-88A0A140T8N1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv1-88A0A140T8N1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv1-88A0A140T8N1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv1-88A0A140T8N1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv1-88A0A140T8N1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv1-88A0A140T8N1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Igkv1-88A0A140T8N1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Gm9397-201ENSMUST00000200125 605 ntBASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.94□□□□□ -0.02
Igkv1-88A0A140T8N1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv1-88A0A140T8N1 Gm24970-201ENSMUST00000175582 82 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms