Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Peli2-204ENSMUST00000226513 1320 ntBASIC16.79■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trdv2-1A0A0G2JGB9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.78■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdv2-1A0A0G2JGB9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdv2-1A0A0G2JGB9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.77■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.76■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trdv2-1A0A0G2JGB9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdv2-1A0A0G2JGB9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.71■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdv2-1A0A0G2JGB9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms