RNA–Protein interactions for RNA: ENST00000637874.1

EFHC1-236, Transcript of EF-hand domain containing 1, humanhuman

TSL 3

Gene EFHC1, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-236ENST00000637874 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
EFHC1-236ENST00000637874 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
EFHC1-236ENST00000637874 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
EFHC1-236ENST00000637874 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
EFHC1-236ENST00000637874 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
EFHC1-236ENST00000637874 FOXD1Q16676 465 aa15.5■□□□□ 0.07
EFHC1-236ENST00000637874 MSH5O43196 834 aa15.08■□□□□ 0
EFHC1-236ENST00000637874 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
EFHC1-236ENST00000637874 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
EFHC1-236ENST00000637874 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
EFHC1-236ENST00000637874 ADRA2BP18089 450 aa13.39□□□□□ -0.27
EFHC1-236ENST00000637874 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
EFHC1-236ENST00000637874 POTEHQ6S545 545 aa12.96□□□□□ -0.33
EFHC1-236ENST00000637874 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
EFHC1-236ENST00000637874 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
EFHC1-236ENST00000637874 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
EFHC1-236ENST00000637874 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
EFHC1-236ENST00000637874 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
EFHC1-236ENST00000637874 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
EFHC1-236ENST00000637874 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
EFHC1-236ENST00000637874 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
EFHC1-236ENST00000637874 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
EFHC1-236ENST00000637874 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
EFHC1-236ENST00000637874 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
EFHC1-236ENST00000637874 DSG3P32926 999 aa11.47□□□□□ -0.57
EFHC1-236ENST00000637874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.59
EFHC1-236ENST00000637874 KCNA4P22459 653 aa11.37□□□□□ -0.59
EFHC1-236ENST00000637874 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
EFHC1-236ENST00000637874 CAPN15O75808 1086 aa11.26□□□□□ -0.61
EFHC1-236ENST00000637874 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
EFHC1-236ENST00000637874 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
EFHC1-236ENST00000637874 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
EFHC1-236ENST00000637874 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
EFHC1-236ENST00000637874 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
EFHC1-236ENST00000637874 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
EFHC1-236ENST00000637874 SLC4A1APQ9BWU0 796 aaKnown RBP10.96□□□□□ -0.65
EFHC1-236ENST00000637874 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
EFHC1-236ENST00000637874 HAX1O00165 279 aa10.87□□□□□ -0.67
EFHC1-236ENST00000637874 ABCB7O75027 752 aa10.86□□□□□ -0.67
EFHC1-236ENST00000637874 LHX8Q68G74 356 aa10.81□□□□□ -0.68
EFHC1-236ENST00000637874 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
EFHC1-236ENST00000637874 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
EFHC1-236ENST00000637874 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
EFHC1-236ENST00000637874 PIP4P2Q8N4L2 257 aa10.7□□□□□ -0.7
EFHC1-236ENST00000637874 APLP2Q06481 763 aa10.61□□□□□ -0.71
EFHC1-236ENST00000637874 EVX2Q03828 476 aa10.57□□□□□ -0.72
EFHC1-236ENST00000637874 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
EFHC1-236ENST00000637874 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
EFHC1-236ENST00000637874 ZBTB22O15209 634 aa10.47□□□□□ -0.73
EFHC1-236ENST00000637874 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
EFHC1-236ENST00000637874 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.74
EFHC1-236ENST00000637874 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
EFHC1-236ENST00000637874 GABBR2O75899 941 aa10.3□□□□□ -0.76
EFHC1-236ENST00000637874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
EFHC1-236ENST00000637874 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
EFHC1-236ENST00000637874 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
EFHC1-236ENST00000637874 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
EFHC1-236ENST00000637874 POTEMA6NI47 508 aa10.26□□□□□ -0.77
EFHC1-236ENST00000637874 AMER1Q5JTC6 1135 aaPredicted RBP10.23□□□□□ -0.77
EFHC1-236ENST00000637874 FOXD4L1Q9NU39 408 aa10.23□□□□□ -0.77
EFHC1-236ENST00000637874 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
EFHC1-236ENST00000637874 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
EFHC1-236ENST00000637874 POLA2Q14181 598 aa10.16□□□□□ -0.78
EFHC1-236ENST00000637874 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.78
EFHC1-236ENST00000637874 C19orf67A6NJJ6 358 aa10.14□□□□□ -0.79
EFHC1-236ENST00000637874 SLC4A2P04920 1241 aa10.04□□□□□ -0.8
EFHC1-236ENST00000637874 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
EFHC1-236ENST00000637874 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
EFHC1-236ENST00000637874 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
EFHC1-236ENST00000637874 FKBP8Q14318 412 aa9.93□□□□□ -0.82
EFHC1-236ENST00000637874 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
EFHC1-236ENST00000637874 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
EFHC1-236ENST00000637874 DCBLD2Q96PD2 775 aa9.81□□□□□ -0.84
EFHC1-236ENST00000637874 CLCN6P51797 869 aa9.77□□□□□ -0.85
EFHC1-236ENST00000637874 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
EFHC1-236ENST00000637874 MYCNP04198 464 aaPredicted RBP9.73□□□□□ -0.85
EFHC1-236ENST00000637874 POTEB2H3BUK9 544 aa9.68□□□□□ -0.86
EFHC1-236ENST00000637874 CLEC11AQ9Y240 323 aa9.68□□□□□ -0.86
EFHC1-236ENST00000637874 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
EFHC1-236ENST00000637874 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
EFHC1-236ENST00000637874 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
EFHC1-236ENST00000637874 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
EFHC1-236ENST00000637874 FAM163AQ96GL9 167 aaPredicted RBP9.55□□□□□ -0.88
EFHC1-236ENST00000637874 CDAN1Q8IWY9 1227 aa9.51□□□□□ -0.89
EFHC1-236ENST00000637874 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
EFHC1-236ENST00000637874 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
EFHC1-236ENST00000637874 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
EFHC1-236ENST00000637874 ATF5Q9Y2D1 282 aaPredicted RBP9.46□□□□□ -0.9
EFHC1-236ENST00000637874 PLCB2Q00722 1185 aa9.43□□□□□ -0.9
EFHC1-236ENST00000637874 MMRN1Q13201 1228 aa9.43□□□□□ -0.9
EFHC1-236ENST00000637874 MAMSTRQ6ZN01 415 aa9.43□□□□□ -0.9
EFHC1-236ENST00000637874 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
EFHC1-236ENST00000637874 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
EFHC1-236ENST00000637874 GALR2O43603 387 aaPredicted RBP9.36□□□□□ -0.91
EFHC1-236ENST00000637874 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
EFHC1-236ENST00000637874 FARP1Q9Y4F1 1045 aaPredicted RBP9.34□□□□□ -0.91
EFHC1-236ENST00000637874 DCAF8L2P0C7V8 631 aa9.32□□□□□ -0.92
EFHC1-236ENST00000637874 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
EFHC1-236ENST00000637874 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
EFHC1-236ENST00000637874 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms