RNA–Protein interactions for RNA: ENST00000637406.1

ATP1A3-213, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 5

Gene ATP1A3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-213ENST00000637406 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
ATP1A3-213ENST00000637406 AEBP2Q6ZN18 517 aaPredicted RBP15.2■□□□□ 0.02
ATP1A3-213ENST00000637406 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
ATP1A3-213ENST00000637406 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
ATP1A3-213ENST00000637406 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
ATP1A3-213ENST00000637406 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
ATP1A3-213ENST00000637406 KCNA4P22459 653 aa13.59□□□□□ -0.23
ATP1A3-213ENST00000637406 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
ATP1A3-213ENST00000637406 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
ATP1A3-213ENST00000637406 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
ATP1A3-213ENST00000637406 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
ATP1A3-213ENST00000637406 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
ATP1A3-213ENST00000637406 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
ATP1A3-213ENST00000637406 ADRA2BP18089 450 aa12.81□□□□□ -0.36
ATP1A3-213ENST00000637406 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.37
ATP1A3-213ENST00000637406 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
ATP1A3-213ENST00000637406 BCANQ96GW7 911 aa12.55□□□□□ -0.4
ATP1A3-213ENST00000637406 ZBTB22O15209 634 aa12.53□□□□□ -0.4
ATP1A3-213ENST00000637406 ARXQ96QS3 562 aa12.53□□□□□ -0.4
ATP1A3-213ENST00000637406 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
ATP1A3-213ENST00000637406 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
ATP1A3-213ENST00000637406 TIMELESSQ9UNS1 1208 aa12.33□□□□□ -0.44
ATP1A3-213ENST00000637406 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
ATP1A3-213ENST00000637406 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
ATP1A3-213ENST00000637406 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
ATP1A3-213ENST00000637406 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
ATP1A3-213ENST00000637406 FKBP8Q14318 412 aa12.22□□□□□ -0.45
ATP1A3-213ENST00000637406 PPP6R1Q9UPN7 881 aa12.22□□□□□ -0.45
ATP1A3-213ENST00000637406 TULP1O00294 542 aaPredicted RBP12.21□□□□□ -0.45
ATP1A3-213ENST00000637406 HOMEZQ8IX15 550 aa12.17□□□□□ -0.46
ATP1A3-213ENST00000637406 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
ATP1A3-213ENST00000637406 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
ATP1A3-213ENST00000637406 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
ATP1A3-213ENST00000637406 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
ATP1A3-213ENST00000637406 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
ATP1A3-213ENST00000637406 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
ATP1A3-213ENST00000637406 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
ATP1A3-213ENST00000637406 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
ATP1A3-213ENST00000637406 PODXL2Q9NZ53 605 aa11.72□□□□□ -0.53
ATP1A3-213ENST00000637406 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
ATP1A3-213ENST00000637406 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
ATP1A3-213ENST00000637406 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
ATP1A3-213ENST00000637406 FBLN2P98095 1184 aa11.62□□□□□ -0.55
ATP1A3-213ENST00000637406 FOXD1Q16676 465 aa11.61□□□□□ -0.55
ATP1A3-213ENST00000637406 APLP2Q06481 763 aa11.58□□□□□ -0.56
ATP1A3-213ENST00000637406 ATXN8OSP0DMR3 200 aa11.57□□□□□ -0.56
ATP1A3-213ENST00000637406 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
ATP1A3-213ENST00000637406 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
ATP1A3-213ENST00000637406 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
ATP1A3-213ENST00000637406 NBR1Q14596 966 aa11.5□□□□□ -0.57
ATP1A3-213ENST00000637406 MYT1Q01538 1121 aa11.47□□□□□ -0.57
ATP1A3-213ENST00000637406 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
ATP1A3-213ENST00000637406 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
ATP1A3-213ENST00000637406 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
ATP1A3-213ENST00000637406 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
ATP1A3-213ENST00000637406 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
ATP1A3-213ENST00000637406 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
ATP1A3-213ENST00000637406 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
ATP1A3-213ENST00000637406 PKD2Q13563 968 aa11.31□□□□□ -0.6
ATP1A3-213ENST00000637406 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
ATP1A3-213ENST00000637406 SCAF1Q9H7N4 1312 aaKnown RBP11.29□□□□□ -0.6
ATP1A3-213ENST00000637406 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
ATP1A3-213ENST00000637406 TSHZ2Q9NRE2 1034 aa11.28□□□□□ -0.6
ATP1A3-213ENST00000637406 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
ATP1A3-213ENST00000637406 VASPP50552 380 aaPredicted RBP11.22□□□□□ -0.61
ATP1A3-213ENST00000637406 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
ATP1A3-213ENST00000637406 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
ATP1A3-213ENST00000637406 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
ATP1A3-213ENST00000637406 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
ATP1A3-213ENST00000637406 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
ATP1A3-213ENST00000637406 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
ATP1A3-213ENST00000637406 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
ATP1A3-213ENST00000637406 HRCP23327 699 aa11.06□□□□□ -0.64
ATP1A3-213ENST00000637406 ECM2O94769 699 aaPredicted RBP11.01□□□□□ -0.65
ATP1A3-213ENST00000637406 CCDC9Q9Y3X0 531 aaKnown RBP10.92□□□□□ -0.66
ATP1A3-213ENST00000637406 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
ATP1A3-213ENST00000637406 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
ATP1A3-213ENST00000637406 PROM2Q8N271 834 aa10.89□□□□□ -0.67
ATP1A3-213ENST00000637406 EIF5BO60841 1220 aaKnown RBP10.88□□□□□ -0.67
ATP1A3-213ENST00000637406 RGL2O15211 777 aa10.85□□□□□ -0.67
ATP1A3-213ENST00000637406 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
ATP1A3-213ENST00000637406 ZBTB7CA1YPR0 619 aa10.81□□□□□ -0.68
ATP1A3-213ENST00000637406 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
ATP1A3-213ENST00000637406 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
ATP1A3-213ENST00000637406 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
ATP1A3-213ENST00000637406 MAPK8IP2Q13387 824 aaPredicted RBP10.74□□□□□ -0.69
ATP1A3-213ENST00000637406 ZMYND15Q9H091 742 aa10.74□□□□□ -0.69
ATP1A3-213ENST00000637406 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
ATP1A3-213ENST00000637406 LOC105371045A0A1W2PR82 267 aa10.71□□□□□ -0.69
ATP1A3-213ENST00000637406 ARID3AQ99856 593 aa10.71□□□□□ -0.69
ATP1A3-213ENST00000637406 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
ATP1A3-213ENST00000637406 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
ATP1A3-213ENST00000637406 HOXD11P31277 338 aaPredicted RBP10.68□□□□□ -0.7
ATP1A3-213ENST00000637406 TRHP20396 242 aaPredicted RBP10.65□□□□□ -0.7
ATP1A3-213ENST00000637406 SHROOM4Q9ULL8 1493 aa10.63□□□□□ -0.71
ATP1A3-213ENST00000637406 HMGB1P09429 215 aaKnown RBP10.63□□□□□ -0.71
ATP1A3-213ENST00000637406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
ATP1A3-213ENST00000637406 P3H3Q8IVL6 736 aa10.62□□□□□ -0.71
ATP1A3-213ENST00000637406 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
ATP1A3-213ENST00000637406 CDK11BP21127 795 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms