RNA–Protein interactions for RNA: ENST00000636820.1

ZEB2-238, Transcript of zinc finger E-box binding homeobox 2, human

TSL 5

Gene ZEB2, Length 9,115 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-238	ENST00000636820	PELP1	Q8IZL8	1130 aa	Known RBP	11.77	□□□□□ -0.52
ZEB2-238	ENST00000636820	MYT1	Q01538	1121 aa		11.66	□□□□□ -0.54
ZEB2-238	ENST00000636820	ERICH6	Q7L0X2	663 aa		11.56	□□□□□ -0.56
ZEB2-238	ENST00000636820	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.2	□□□□□ -0.62
ZEB2-238	ENST00000636820	CCER1	Q8TC90	406 aa	Predicted RBP	11.19	□□□□□ -0.62
ZEB2-238	ENST00000636820	EHMT2	Q96KQ7	1210 aa		11.13	□□□□□ -0.63
ZEB2-238	ENST00000636820	CENPB	P07199	599 aa	Predicted RBP	11.02	□□□□□ -0.65
ZEB2-238	ENST00000636820	YTHDC1	Q96MU7	727 aa	Known RBP	10.86	□□□□□ -0.67
ZEB2-238	ENST00000636820	DCAF8L2	P0C7V8	631 aa		10.77	□□□□□ -0.69
ZEB2-238	ENST00000636820	NEFL	P07196	543 aa		10.76	□□□□□ -0.69
ZEB2-238	ENST00000636820	RANGAP1	P46060	587 aa	Predicted RBP	10.73	□□□□□ -0.69
ZEB2-238	ENST00000636820	DAXX	Q9UER7	740 aa	Predicted RBP	10.72	□□□□□ -0.69
ZEB2-238	ENST00000636820	PCGF6	Q9BYE7	350 aa		10.71	□□□□□ -0.69
ZEB2-238	ENST00000636820	RTL5	Q5HYW3	569 aa	Predicted RBP	10.61	□□□□□ -0.71
ZEB2-238	ENST00000636820	SUPT5H	O00267	1087 aa	Known RBP	10.6	□□□□□ -0.71
ZEB2-238	ENST00000636820	EIF5B	O60841	1220 aa	Known RBP	10.6	□□□□□ -0.71
ZEB2-238	ENST00000636820	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.47	□□□□□ -0.73
ZEB2-238	ENST00000636820	GLIPR1L2	Q4G1C9	344 aa		10.43	□□□□□ -0.74
ZEB2-238	ENST00000636820	ZEB1	P37275	1124 aa	Predicted RBP	10.43	□□□□□ -0.74
ZEB2-238	ENST00000636820	APLP2	Q06481	763 aa		10.39	□□□□□ -0.75
ZEB2-238	ENST00000636820	CNGB1	Q14028	1251 aa	Predicted RBP	10.26	□□□□□ -0.77
ZEB2-238	ENST00000636820	CLSPN	Q9HAW4	1339 aa		10.22	□□□□□ -0.77
ZEB2-238	ENST00000636820	BCAN	Q96GW7	911 aa		10.2	□□□□□ -0.78
ZEB2-238	ENST00000636820	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.17	□□□□□ -0.78
ZEB2-238	ENST00000636820	GTF3C3	Q9Y5Q9	886 aa		10.16	□□□□□ -0.78
ZEB2-238	ENST00000636820	HRC	P23327	699 aa		10.14	□□□□□ -0.79
ZEB2-238	ENST00000636820	SHROOM4	Q9ULL8	1493 aa		10.12	□□□□□ -0.79
ZEB2-238	ENST00000636820	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.12	□□□□□ -0.79
ZEB2-238	ENST00000636820	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.09	□□□□□ -0.79
ZEB2-238	ENST00000636820	POLR3GL	Q9BT43	218 aa		10.08	□□□□□ -0.8
ZEB2-238	ENST00000636820	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.05	□□□□□ -0.8
ZEB2-238	ENST00000636820	NBR1	Q14596	966 aa		10.03	□□□□□ -0.8
ZEB2-238	ENST00000636820	BCL11A	Q9H165	835 aa		10.02	□□□□□ -0.81
ZEB2-238	ENST00000636820	ARX	Q96QS3	562 aa		10.01	□□□□□ -0.81
ZEB2-238	ENST00000636820	NPM2	Q86SE8	214 aa	Known RBP	9.98	□□□□□ -0.81
ZEB2-238	ENST00000636820	MYT1L	Q9UL68	1186 aa		9.98	□□□□□ -0.81
ZEB2-238	ENST00000636820	ATP1B4	Q9UN42	357 aa	Predicted RBP	9.98	□□□□□ -0.81
ZEB2-238	ENST00000636820	ANP32B	Q92688	251 aa	Known RBP	9.96	□□□□□ -0.81
ZEB2-238	ENST00000636820	DIEXF	Q68CQ4	756 aa	Known RBP	9.96	□□□□□ -0.82
ZEB2-238	ENST00000636820	ANP32A	P39687	249 aa	Known RBP	9.94	□□□□□ -0.82
ZEB2-238	ENST00000636820	CDK11B	P21127	795 aa	Known RBP	9.94	□□□□□ -0.82
ZEB2-238	ENST00000636820	TNNT2	P45379	298 aa	Predicted RBP	9.93	□□□□□ -0.82
ZEB2-238	ENST00000636820	RTN4	Q9NQC3	1192 aa	Known RBP	9.91	□□□□□ -0.82
ZEB2-238	ENST00000636820	TRIM26	Q12899	539 aa	Predicted RBP	9.82	□□□□□ -0.84
ZEB2-238	ENST00000636820	SLC4A1AP	Q9BWU0	796 aa	Known RBP	9.8	□□□□□ -0.84
ZEB2-238	ENST00000636820	NAP1L5	Q96NT1	182 aa	Predicted RBP	9.77	□□□□□ -0.85
ZEB2-238	ENST00000636820	ACIN1	Q9UKV3	1341 aa	Known RBP	9.76	□□□□□ -0.85
ZEB2-238	ENST00000636820	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.76	□□□□□ -0.85
ZEB2-238	ENST00000636820	ZNF326	Q5BKZ1	582 aa	Known RBP	9.76	□□□□□ -0.85
ZEB2-238	ENST00000636820	CHIC1	Q5VXU3	224 aa		9.76	□□□□□ -0.85
ZEB2-238	ENST00000636820	HSP90AA1	P07900	732 aa	Known RBP	9.75	□□□□□ -0.85
ZEB2-238	ENST00000636820	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.74	□□□□□ -0.85
ZEB2-238	ENST00000636820	ITGAE	P38570	1179 aa		9.73	□□□□□ -0.85
ZEB2-238	ENST00000636820	ARID4B	Q4LE39	1312 aa	Predicted RBP	9.7	□□□□□ -0.86
ZEB2-238	ENST00000636820	UBTF	P17480	764 aa	Known RBP	9.69	□□□□□ -0.86
ZEB2-238	ENST00000636820	TRIM44	Q96DX7	344 aa	Predicted RBP	9.68	□□□□□ -0.86
ZEB2-238	ENST00000636820	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.68	□□□□□ -0.86
ZEB2-238	ENST00000636820	CANX	P27824	592 aa	Known RBP	9.66	□□□□□ -0.86
ZEB2-238	ENST00000636820	FKBP8	Q14318	412 aa		9.66	□□□□□ -0.86
ZEB2-238	ENST00000636820	ANP32E	Q9BTT0	268 aa		9.65	□□□□□ -0.86
ZEB2-238	ENST00000636820	DNTTIP2	Q5QJE6	756 aa	Known RBP	9.64	□□□□□ -0.87
ZEB2-238	ENST00000636820	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.63	□□□□□ -0.87
ZEB2-238	ENST00000636820	ARID3A	Q99856	593 aa		9.63	□□□□□ -0.87
ZEB2-238	ENST00000636820	TRIM41	Q8WV44	630 aa		9.61	□□□□□ -0.87
ZEB2-238	ENST00000636820	SCAF1	Q9H7N4	1312 aa	Known RBP	9.6	□□□□□ -0.87
ZEB2-238	ENST00000636820	SLC24A1	O60721	1099 aa		9.58	□□□□□ -0.88
ZEB2-238	ENST00000636820	NCL	P19338	710 aa	Known RBP	9.58	□□□□□ -0.88
ZEB2-238	ENST00000636820		A0A0U1RQG5	324 aa	Predicted RBP	9.58	□□□□□ -0.88
ZEB2-238	ENST00000636820	CCDC136	Q96JN2	1154 aa		9.57	□□□□□ -0.88
ZEB2-238	ENST00000636820	ANP32C	O43423	234 aa		9.57	□□□□□ -0.88
ZEB2-238	ENST00000636820	ERICH6B	Q5W0A0	696 aa		9.55	□□□□□ -0.88
ZEB2-238	ENST00000636820	UPF2	Q9HAU5	1272 aa	Known RBP	9.55	□□□□□ -0.88
ZEB2-238	ENST00000636820	NEFM	P07197	916 aa		9.54	□□□□□ -0.88
ZEB2-238	ENST00000636820	TNNT3	P45378	269 aa	Predicted RBP	9.54	□□□□□ -0.88
ZEB2-238	ENST00000636820	CALR	P27797	417 aa	Known RBP	9.54	□□□□□ -0.88
ZEB2-238	ENST00000636820	PTMA	P06454	111 aa	Known RBP	9.53	□□□□□ -0.88
ZEB2-238	ENST00000636820	TPRN	Q4KMQ1	711 aa		9.5	□□□□□ -0.89
ZEB2-238	ENST00000636820	PODXL2	Q9NZ53	605 aa		9.49	□□□□□ -0.89
ZEB2-238	ENST00000636820	NEUROD1	Q13562	356 aa		9.47	□□□□□ -0.89
ZEB2-238	ENST00000636820	DEK	P35659	375 aa	Known RBP	9.46	□□□□□ -0.89
ZEB2-238	ENST00000636820	ZBTB7C	A1YPR0	619 aa		9.46	□□□□□ -0.9
ZEB2-238	ENST00000636820	VSIG10	Q8N0Z9	540 aa		9.45	□□□□□ -0.9
ZEB2-238	ENST00000636820	LAS1L	Q9Y4W2	734 aa	Known RBP	9.43	□□□□□ -0.9
ZEB2-238	ENST00000636820	IRX6	P78412	446 aa	Predicted RBP	9.43	□□□□□ -0.9
ZEB2-238	ENST00000636820	LOC105371045	A0A1W2PR82	267 aa		9.41	□□□□□ -0.9
ZEB2-238	ENST00000636820	APP	P05067	770 aa		9.41	□□□□□ -0.9
ZEB2-238	ENST00000636820	PLCB2	Q00722	1185 aa		9.38	□□□□□ -0.91
ZEB2-238	ENST00000636820	TULP1	O00294	542 aa	Predicted RBP	9.36	□□□□□ -0.91
ZEB2-238	ENST00000636820	NCBP3	Q53F19	620 aa	Known RBP	9.35	□□□□□ -0.91
ZEB2-238	ENST00000636820	PRKCSH	P14314	528 aa	Predicted RBP	9.35	□□□□□ -0.91
ZEB2-238	ENST00000636820	MSN	P26038	577 aa	Known RBP	9.35	□□□□□ -0.91
ZEB2-238	ENST00000636820	DDRGK1	Q96HY6	314 aa		9.35	□□□□□ -0.91
ZEB2-238	ENST00000636820	SALL2	Q9Y467	1007 aa	Predicted RBP	9.34	□□□□□ -0.91
ZEB2-238	ENST00000636820	TIMELESS	Q9UNS1	1208 aa		9.34	□□□□□ -0.91
ZEB2-238	ENST00000636820	PTMS	P20962	102 aa		9.34	□□□□□ -0.92
ZEB2-238	ENST00000636820	CHAF1A	Q13111	956 aa	Predicted RBP	9.34	□□□□□ -0.92
ZEB2-238	ENST00000636820	HSP90AA2P	Q14568	343 aa	Predicted RBP	9.34	□□□□□ -0.92
ZEB2-238	ENST00000636820	SENP3-EIF4A1	A0A087X0R7	540 aa		9.33	□□□□□ -0.92
ZEB2-238	ENST00000636820	BECN1	Q14457	450 aa		9.33	□□□□□ -0.92
ZEB2-238	ENST00000636820	PKNOX2	Q96KN3	472 aa		9.33	□□□□□ -0.92

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