RNA–Protein interactions for RNA: ENST00000598445.5

LINC01440-204, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5

Gene LINC01440, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-204ENST00000598445 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
LINC01440-204ENST00000598445 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
LINC01440-204ENST00000598445 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
LINC01440-204ENST00000598445 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
LINC01440-204ENST00000598445 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
LINC01440-204ENST00000598445 FOXD1Q16676 465 aa15.61■□□□□ 0.09
LINC01440-204ENST00000598445 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
LINC01440-204ENST00000598445 MSH5O43196 834 aa14.75□□□□□ -0.05
LINC01440-204ENST00000598445 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
LINC01440-204ENST00000598445 ADRA2BP18089 450 aa14.31□□□□□ -0.12
LINC01440-204ENST00000598445 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
LINC01440-204ENST00000598445 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
LINC01440-204ENST00000598445 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
LINC01440-204ENST00000598445 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
LINC01440-204ENST00000598445 KCNA4P22459 653 aa13.21□□□□□ -0.29
LINC01440-204ENST00000598445 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
LINC01440-204ENST00000598445 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
LINC01440-204ENST00000598445 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
LINC01440-204ENST00000598445 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
LINC01440-204ENST00000598445 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
LINC01440-204ENST00000598445 RNF216Q9NWF9 866 aaPredicted RBP12.76□□□□□ -0.37
LINC01440-204ENST00000598445 MYT1Q01538 1121 aa12.75□□□□□ -0.37
LINC01440-204ENST00000598445 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
LINC01440-204ENST00000598445 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
LINC01440-204ENST00000598445 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
LINC01440-204ENST00000598445 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
LINC01440-204ENST00000598445 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
LINC01440-204ENST00000598445 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
LINC01440-204ENST00000598445 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
LINC01440-204ENST00000598445 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
LINC01440-204ENST00000598445 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
LINC01440-204ENST00000598445 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
LINC01440-204ENST00000598445 POTEHQ6S545 545 aa12.2□□□□□ -0.46
LINC01440-204ENST00000598445 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
LINC01440-204ENST00000598445 ZBTB22O15209 634 aa12.11□□□□□ -0.47
LINC01440-204ENST00000598445 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
LINC01440-204ENST00000598445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC01440-204ENST00000598445 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
LINC01440-204ENST00000598445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
LINC01440-204ENST00000598445 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
LINC01440-204ENST00000598445 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
LINC01440-204ENST00000598445 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
LINC01440-204ENST00000598445 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
LINC01440-204ENST00000598445 APLP2Q06481 763 aa11.77□□□□□ -0.53
LINC01440-204ENST00000598445 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
LINC01440-204ENST00000598445 ERICH6Q7L0X2 663 aa11.63□□□□□ -0.55
LINC01440-204ENST00000598445 DSG3P32926 999 aa11.56□□□□□ -0.56
LINC01440-204ENST00000598445 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
LINC01440-204ENST00000598445 CAPN15O75808 1086 aa11.48□□□□□ -0.57
LINC01440-204ENST00000598445 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
LINC01440-204ENST00000598445 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
LINC01440-204ENST00000598445 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
LINC01440-204ENST00000598445 PRKCSHP14314 528 aaPredicted RBP11.27□□□□□ -0.61
LINC01440-204ENST00000598445 ABCB7O75027 752 aa11.24□□□□□ -0.61
LINC01440-204ENST00000598445 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
LINC01440-204ENST00000598445 POLA2Q14181 598 aa11.23□□□□□ -0.61
LINC01440-204ENST00000598445 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
LINC01440-204ENST00000598445 FBLN2P98095 1184 aa11.18□□□□□ -0.62
LINC01440-204ENST00000598445 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
LINC01440-204ENST00000598445 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
LINC01440-204ENST00000598445 FKBP8Q14318 412 aa11.06□□□□□ -0.64
LINC01440-204ENST00000598445 HRCP23327 699 aa11.05□□□□□ -0.64
LINC01440-204ENST00000598445 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
LINC01440-204ENST00000598445 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
LINC01440-204ENST00000598445 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
LINC01440-204ENST00000598445 BCL11AQ9H165 835 aa10.91□□□□□ -0.66
LINC01440-204ENST00000598445 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
LINC01440-204ENST00000598445 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
LINC01440-204ENST00000598445 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
LINC01440-204ENST00000598445 PROM2Q8N271 834 aa10.81□□□□□ -0.68
LINC01440-204ENST00000598445 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
LINC01440-204ENST00000598445 CENPBP07199 599 aaPredicted RBP10.8□□□□□ -0.68
LINC01440-204ENST00000598445 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
LINC01440-204ENST00000598445 FBXO3Q9UK99 471 aa10.79□□□□□ -0.68
LINC01440-204ENST00000598445 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
LINC01440-204ENST00000598445 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.69
LINC01440-204ENST00000598445 HAX1O00165 279 aa10.69□□□□□ -0.7
LINC01440-204ENST00000598445 EIF5BO60841 1220 aaKnown RBP10.66□□□□□ -0.7
LINC01440-204ENST00000598445 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC01440-204ENST00000598445 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
LINC01440-204ENST00000598445 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
LINC01440-204ENST00000598445 EVX2Q03828 476 aa10.61□□□□□ -0.71
LINC01440-204ENST00000598445 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
LINC01440-204ENST00000598445 REM2Q8IYK8 340 aaPredicted RBP10.53□□□□□ -0.72
LINC01440-204ENST00000598445 VASPP50552 380 aaPredicted RBP10.51□□□□□ -0.73
LINC01440-204ENST00000598445 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
LINC01440-204ENST00000598445 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
LINC01440-204ENST00000598445 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
LINC01440-204ENST00000598445 ZEB1P37275 1124 aaPredicted RBP10.48□□□□□ -0.73
LINC01440-204ENST00000598445 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC01440-204ENST00000598445 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
LINC01440-204ENST00000598445 PLEKHG5O94827 1062 aa10.43□□□□□ -0.74
LINC01440-204ENST00000598445 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
LINC01440-204ENST00000598445 UBE2Q2Q8WVN8 375 aa10.42□□□□□ -0.74
LINC01440-204ENST00000598445 ARXQ96QS3 562 aa10.42□□□□□ -0.74
LINC01440-204ENST00000598445 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
LINC01440-204ENST00000598445 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
LINC01440-204ENST00000598445 LHX8Q68G74 356 aa10.38□□□□□ -0.75
LINC01440-204ENST00000598445 MIER1Q8N108 512 aa10.38□□□□□ -0.75
LINC01440-204ENST00000598445 PLCD3Q8N3E9 789 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms