RNA–Protein interactions for RNA: ENST00000559293.1

SPPL2A-205, Transcript of signal peptide peptidase like 2A, humanhuman

TSL 3

Gene SPPL2A, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-205ENST00000559293 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
SPPL2A-205ENST00000559293 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
SPPL2A-205ENST00000559293 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
SPPL2A-205ENST00000559293 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
SPPL2A-205ENST00000559293 PHF23Q9BUL5 403 aaPredicted RBP16.2■□□□□ 0.18
SPPL2A-205ENST00000559293 FOXD1Q16676 465 aa15.61■□□□□ 0.09
SPPL2A-205ENST00000559293 MSH5O43196 834 aa15.06■□□□□ 0
SPPL2A-205ENST00000559293 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
SPPL2A-205ENST00000559293 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
SPPL2A-205ENST00000559293 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
SPPL2A-205ENST00000559293 ADRA2BP18089 450 aa13.56□□□□□ -0.24
SPPL2A-205ENST00000559293 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
SPPL2A-205ENST00000559293 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
SPPL2A-205ENST00000559293 POTEHQ6S545 545 aa12.92□□□□□ -0.34
SPPL2A-205ENST00000559293 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
SPPL2A-205ENST00000559293 RNF39Q9H2S5 420 aa12.74□□□□□ -0.37
SPPL2A-205ENST00000559293 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
SPPL2A-205ENST00000559293 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
SPPL2A-205ENST00000559293 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
SPPL2A-205ENST00000559293 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
SPPL2A-205ENST00000559293 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
SPPL2A-205ENST00000559293 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
SPPL2A-205ENST00000559293 DSG3P32926 999 aa11.53□□□□□ -0.56
SPPL2A-205ENST00000559293 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
SPPL2A-205ENST00000559293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.57
SPPL2A-205ENST00000559293 CNKSR2Q8WXI2 1034 aa11.37□□□□□ -0.59
SPPL2A-205ENST00000559293 KCNA4P22459 653 aa11.36□□□□□ -0.59
SPPL2A-205ENST00000559293 CAPN15O75808 1086 aa11.33□□□□□ -0.6
SPPL2A-205ENST00000559293 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
SPPL2A-205ENST00000559293 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
SPPL2A-205ENST00000559293 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
SPPL2A-205ENST00000559293 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
SPPL2A-205ENST00000559293 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
SPPL2A-205ENST00000559293 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
SPPL2A-205ENST00000559293 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
SPPL2A-205ENST00000559293 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
SPPL2A-205ENST00000559293 ABCB7O75027 752 aa10.96□□□□□ -0.65
SPPL2A-205ENST00000559293 HAX1O00165 279 aa10.91□□□□□ -0.66
SPPL2A-205ENST00000559293 SLC4A1APQ9BWU0 796 aaKnown RBP10.9□□□□□ -0.66
SPPL2A-205ENST00000559293 TRHP20396 242 aaPredicted RBP10.86□□□□□ -0.67
SPPL2A-205ENST00000559293 NPM3O75607 178 aaKnown RBP10.82□□□□□ -0.68
SPPL2A-205ENST00000559293 LHX8Q68G74 356 aa10.82□□□□□ -0.68
SPPL2A-205ENST00000559293 PIP4P2Q8N4L2 257 aa10.75□□□□□ -0.69
SPPL2A-205ENST00000559293 ZNF219Q9P2Y4 722 aaPredicted RBP10.75□□□□□ -0.69
SPPL2A-205ENST00000559293 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
SPPL2A-205ENST00000559293 EVX2Q03828 476 aa10.68□□□□□ -0.7
SPPL2A-205ENST00000559293 APLP2Q06481 763 aa10.6□□□□□ -0.71
SPPL2A-205ENST00000559293 AKT1S1Q96B36 256 aa10.51□□□□□ -0.73
SPPL2A-205ENST00000559293 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPPL2A-205ENST00000559293 ZBTB22O15209 634 aa10.45□□□□□ -0.74
SPPL2A-205ENST00000559293 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
SPPL2A-205ENST00000559293 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
SPPL2A-205ENST00000559293 GABBR2O75899 941 aa10.35□□□□□ -0.75
SPPL2A-205ENST00000559293 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
SPPL2A-205ENST00000559293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.3□□□□□ -0.76
SPPL2A-205ENST00000559293 HNRNPUL2Q1KMD3 747 aaKnown RBP10.3□□□□□ -0.76
SPPL2A-205ENST00000559293 POLA2Q14181 598 aa10.28□□□□□ -0.76
SPPL2A-205ENST00000559293 POTEMA6NI47 508 aa10.26□□□□□ -0.77
SPPL2A-205ENST00000559293 SLC4A2P04920 1241 aa10.2□□□□□ -0.78
SPPL2A-205ENST00000559293 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
SPPL2A-205ENST00000559293 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
SPPL2A-205ENST00000559293 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
SPPL2A-205ENST00000559293 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
SPPL2A-205ENST00000559293 PCDH10Q9P2E7 1040 aa10.12□□□□□ -0.79
SPPL2A-205ENST00000559293 PRKAR2AP13861 404 aaKnown RBP10.06□□□□□ -0.8
SPPL2A-205ENST00000559293 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
SPPL2A-205ENST00000559293 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
SPPL2A-205ENST00000559293 OSCARQ8IYS5 282 aa9.99□□□□□ -0.81
SPPL2A-205ENST00000559293 OTUD5Q96G74 571 aa9.99□□□□□ -0.81
SPPL2A-205ENST00000559293 ZBTB12Q9Y330 459 aaPredicted RBP9.94□□□□□ -0.82
SPPL2A-205ENST00000559293 DCBLD2Q96PD2 775 aa9.83□□□□□ -0.84
SPPL2A-205ENST00000559293 POTEB2H3BUK9 544 aa9.78□□□□□ -0.84
SPPL2A-205ENST00000559293 CLEC11AQ9Y240 323 aa9.76□□□□□ -0.85
SPPL2A-205ENST00000559293 CLCN6P51797 869 aa9.73□□□□□ -0.85
SPPL2A-205ENST00000559293 CHADLQ6NUI6 762 aa9.69□□□□□ -0.86
SPPL2A-205ENST00000559293 SPDYE1Q8NFV5 336 aaPredicted RBP9.68□□□□□ -0.86
SPPL2A-205ENST00000559293 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
SPPL2A-205ENST00000559293 FKBP8Q14318 412 aa9.67□□□□□ -0.86
SPPL2A-205ENST00000559293 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
SPPL2A-205ENST00000559293 ATF5Q9Y2D1 282 aaPredicted RBP9.65□□□□□ -0.86
SPPL2A-205ENST00000559293 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
SPPL2A-205ENST00000559293 FAM163AQ96GL9 167 aaPredicted RBP9.62□□□□□ -0.87
SPPL2A-205ENST00000559293 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
SPPL2A-205ENST00000559293 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
SPPL2A-205ENST00000559293 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
SPPL2A-205ENST00000559293 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
SPPL2A-205ENST00000559293 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
SPPL2A-205ENST00000559293 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
SPPL2A-205ENST00000559293 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
SPPL2A-205ENST00000559293 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
SPPL2A-205ENST00000559293 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
SPPL2A-205ENST00000559293 FARP1Q9Y4F1 1045 aaPredicted RBP9.42□□□□□ -0.9
SPPL2A-205ENST00000559293 PRR29P0C7W0 189 aa9.41□□□□□ -0.9
SPPL2A-205ENST00000559293 MAMSTRQ6ZN01 415 aa9.41□□□□□ -0.9
SPPL2A-205ENST00000559293 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
SPPL2A-205ENST00000559293 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
SPPL2A-205ENST00000559293 SLC24A1O60721 1099 aa9.34□□□□□ -0.91
SPPL2A-205ENST00000559293 SPNS2Q8IVW8 549 aa9.33□□□□□ -0.92
SPPL2A-205ENST00000559293 METRNQ9UJH8 293 aa9.31□□□□□ -0.92
SPPL2A-205ENST00000559293 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms