RNA–Protein interactions for RNA: ENST00000525373.5

LMO7-216, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 672 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-216ENST00000525373 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
LMO7-216ENST00000525373 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
LMO7-216ENST00000525373 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
LMO7-216ENST00000525373 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
LMO7-216ENST00000525373 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
LMO7-216ENST00000525373 FOXD1Q16676 465 aa15.06■□□□□ 0
LMO7-216ENST00000525373 MSH5O43196 834 aa14.41□□□□□ -0.1
LMO7-216ENST00000525373 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
LMO7-216ENST00000525373 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
LMO7-216ENST00000525373 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
LMO7-216ENST00000525373 ADRA2BP18089 450 aa13.04□□□□□ -0.32
LMO7-216ENST00000525373 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
LMO7-216ENST00000525373 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
LMO7-216ENST00000525373 POTEHQ6S545 545 aa12.44□□□□□ -0.42
LMO7-216ENST00000525373 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
LMO7-216ENST00000525373 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
LMO7-216ENST00000525373 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
LMO7-216ENST00000525373 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
LMO7-216ENST00000525373 SCAF1Q9H7N4 1312 aaKnown RBP11.7□□□□□ -0.54
LMO7-216ENST00000525373 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
LMO7-216ENST00000525373 DNAJC5BQ9UF47 199 aa11.33□□□□□ -0.6
LMO7-216ENST00000525373 DSG3P32926 999 aa11.11□□□□□ -0.63
LMO7-216ENST00000525373 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
LMO7-216ENST00000525373 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
LMO7-216ENST00000525373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.673e-9■■□□□ 12.9
LMO7-216ENST00000525373 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
LMO7-216ENST00000525373 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
LMO7-216ENST00000525373 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
LMO7-216ENST00000525373 PPP4R3CPQ6ZMV5 832 aa10.81□□□□□ -0.68
LMO7-216ENST00000525373 CAPN15O75808 1086 aa10.76□□□□□ -0.69
LMO7-216ENST00000525373 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
LMO7-216ENST00000525373 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
LMO7-216ENST00000525373 ABCB7O75027 752 aa10.49□□□□□ -0.73
LMO7-216ENST00000525373 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
LMO7-216ENST00000525373 HAX1O00165 279 aa10.37□□□□□ -0.75
LMO7-216ENST00000525373 EVX2Q03828 476 aa10.37□□□□□ -0.75
LMO7-216ENST00000525373 LHX8Q68G74 356 aa10.37□□□□□ -0.75
LMO7-216ENST00000525373 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
LMO7-216ENST00000525373 TRHP20396 242 aaPredicted RBP10.32□□□□□ -0.76
LMO7-216ENST00000525373 ZNF219Q9P2Y4 722 aaPredicted RBP10.22□□□□□ -0.77
LMO7-216ENST00000525373 FXR2P51116 673 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■□□□ 11.7
LMO7-216ENST00000525373 AKT1S1Q96B36 256 aa10.03□□□□□ -0.8
LMO7-216ENST00000525373 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
LMO7-216ENST00000525373 GABBR2O75899 941 aa9.95□□□□□ -0.82
LMO7-216ENST00000525373 APLP2Q06481 763 aa9.95□□□□□ -0.82
LMO7-216ENST00000525373 PITPNM1O00562 1244 aa9.94□□□□□ -0.82
LMO7-216ENST00000525373 NPM3O75607 178 aaKnown RBP9.93□□□□□ -0.82
LMO7-216ENST00000525373 NCBP3Q53F19 620 aaKnown RBP9.88□□□□□ -0.83
LMO7-216ENST00000525373 SLC4A2P04920 1241 aa9.86□□□□□ -0.83
LMO7-216ENST00000525373 POTEMA6NI47 508 aa9.84□□□□□ -0.83
LMO7-216ENST00000525373 POTEIP0CG38 1075 aa9.84□□□□□ -0.83
LMO7-216ENST00000525373 C19orf67A6NJJ6 358 aa9.82□□□□□ -0.84
LMO7-216ENST00000525373 POLA2Q14181 598 aa9.8□□□□□ -0.84
LMO7-216ENST00000525373 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
LMO7-216ENST00000525373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
LMO7-216ENST00000525373 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
LMO7-216ENST00000525373 SAMD1Q6SPF0 538 aaPredicted RBP9.65□□□□□ -0.86
LMO7-216ENST00000525373 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
LMO7-216ENST00000525373 PCDH10Q9P2E7 1040 aa9.63□□□□□ -0.87
LMO7-216ENST00000525373 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
LMO7-216ENST00000525373 OSCARQ8IYS5 282 aa9.59□□□□□ -0.87
LMO7-216ENST00000525373 POTEB2H3BUK9 544 aa9.49□□□□□ -0.89
LMO7-216ENST00000525373 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
LMO7-216ENST00000525373 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
LMO7-216ENST00000525373 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
LMO7-216ENST00000525373 CHADLQ6NUI6 762 aa9.29□□□□□ -0.92
LMO7-216ENST00000525373 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
LMO7-216ENST00000525373 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
LMO7-216ENST00000525373 CLCN6P51797 869 aa9.21□□□□□ -0.94
LMO7-216ENST00000525373 POTEJP0CG39 1038 aa9.19□□□□□ -0.94
LMO7-216ENST00000525373 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
LMO7-216ENST00000525373 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
LMO7-216ENST00000525373 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
LMO7-216ENST00000525373 CDAN1Q8IWY9 1227 aa9.12□□□□□ -0.95
LMO7-216ENST00000525373 MYCNP04198 464 aaPredicted RBP9.11□□□□□ -0.95
LMO7-216ENST00000525373 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
LMO7-216ENST00000525373 GALR2O43603 387 aaPredicted RBP9.07□□□□□ -0.96
LMO7-216ENST00000525373 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
LMO7-216ENST00000525373 SPDYE2Q495Y8 402 aa9.07□□□□□ -0.96
LMO7-216ENST00000525373 PELP1Q8IZL8 1130 aaKnown RBP9.07□□□□□ -0.96
LMO7-216ENST00000525373 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
LMO7-216ENST00000525373 ZNF579Q8NAF0 562 aaKnown RBP9.06□□□□□ -0.96
LMO7-216ENST00000525373 FARP1Q9Y4F1 1045 aaPredicted RBP8.99□□□□□ -0.97
LMO7-216ENST00000525373 SPNS2Q8IVW8 549 aa8.96□□□□□ -0.98
LMO7-216ENST00000525373 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
LMO7-216ENST00000525373 MAMSTRQ6ZN01 415 aa8.9□□□□□ -0.98
LMO7-216ENST00000525373 PRR29P0C7W0 189 aa8.89□□□□□ -0.99
LMO7-216ENST00000525373 METRNQ9UJH8 293 aa8.89□□□□□ -0.99
LMO7-216ENST00000525373 ZRANB1Q9UGI0 708 aa8.88□□□□□ -0.99
LMO7-216ENST00000525373 C7P10643 843 aa8.78□□□□□ -1
LMO7-216ENST00000525373 KCNA4P22459 653 aa8.78□□□□□ -1
LMO7-216ENST00000525373 ASTLQ6HA08 431 aaPredicted RBP8.78□□□□□ -1
LMO7-216ENST00000525373 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
LMO7-216ENST00000525373 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
LMO7-216ENST00000525373 PHF12Q96QT6 1004 aa8.75□□□□□ -1.01
LMO7-216ENST00000525373 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
LMO7-216ENST00000525373 ATMINO43313 823 aaPredicted RBP8.73□□□□□ -1.01
LMO7-216ENST00000525373 POTEFA5A3E0 1075 aa8.72□□□□□ -1.01
LMO7-216ENST00000525373 ST18O60284 1047 aa8.71□□□□□ -1.02
LMO7-216ENST00000525373 MKRN4PQ13434 485 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms