RNA–Protein interactions for RNA: ENST00000522020.1

MCPH1-206, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-206ENST00000522020 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
MCPH1-206ENST00000522020 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
MCPH1-206ENST00000522020 POTEDQ86YR6 584 aa15.07■□□□□ 0
MCPH1-206ENST00000522020 SENP3Q9H4L4 574 aaPredicted RBP14.36□□□□□ -0.11
MCPH1-206ENST00000522020 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
MCPH1-206ENST00000522020 FOXD1Q16676 465 aa13.67□□□□□ -0.22
MCPH1-206ENST00000522020 MSH5O43196 834 aa13.11□□□□□ -0.31
MCPH1-206ENST00000522020 PIAS4Q8N2W9 510 aaPredicted RBP12.43□□□□□ -0.42
MCPH1-206ENST00000522020 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
MCPH1-206ENST00000522020 PPP6R1Q9UPN7 881 aa11.89□□□□□ -0.51
MCPH1-206ENST00000522020 ADRA2BP18089 450 aa11.78□□□□□ -0.52
MCPH1-206ENST00000522020 POTEHQ6S545 545 aa11.52□□□□□ -0.57
MCPH1-206ENST00000522020 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
MCPH1-206ENST00000522020 DMRT2Q9Y5R5 561 aa11.23□□□□□ -0.61
MCPH1-206ENST00000522020 RNF39Q9H2S5 420 aa11.15□□□□□ -0.62
MCPH1-206ENST00000522020 PLPPR3Q6T4P5 718 aa11.07□□□□□ -0.64
MCPH1-206ENST00000522020 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
MCPH1-206ENST00000522020 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
MCPH1-206ENST00000522020 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
MCPH1-206ENST00000522020 HOXD11P31277 338 aaPredicted RBP10.31□□□□□ -0.76
MCPH1-206ENST00000522020 SP7Q8TDD2 431 aaPredicted RBP10.2□□□□□ -0.78
MCPH1-206ENST00000522020 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
MCPH1-206ENST00000522020 DSG3P32926 999 aa10.06□□□□□ -0.8
MCPH1-206ENST00000522020 DNAJC5BQ9UF47 199 aa10.05□□□□□ -0.8
MCPH1-206ENST00000522020 CHRDL2Q6WN34 429 aa9.88□□□□□ -0.83
MCPH1-206ENST00000522020 RNF216Q9NWF9 866 aaPredicted RBP9.88□□□□□ -0.83
MCPH1-206ENST00000522020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.86□□□□□ -0.83
MCPH1-206ENST00000522020 SPINK5Q9NQ38 1064 aaPredicted RBP9.85□□□□□ -0.83
MCPH1-206ENST00000522020 CAPN15O75808 1086 aa9.82□□□□□ -0.84
MCPH1-206ENST00000522020 CNKSR2Q8WXI2 1034 aa9.66□□□□□ -0.86
MCPH1-206ENST00000522020 PPP4R3CPQ6ZMV5 832 aa9.63□□□□□ -0.87
MCPH1-206ENST00000522020 HAX1O00165 279 aa9.58□□□□□ -0.88
MCPH1-206ENST00000522020 LHX8Q68G74 356 aa9.57□□□□□ -0.88
MCPH1-206ENST00000522020 ABCB7O75027 752 aa9.56□□□□□ -0.88
MCPH1-206ENST00000522020 U3KPZ7 1027 aaPredicted RBP9.56□□□□□ -0.88
MCPH1-206ENST00000522020 EVX2Q03828 476 aa9.49□□□□□ -0.89
MCPH1-206ENST00000522020 RBM42Q9BTD8 480 aaKnown RBP9.48□□□□□ -0.89
MCPH1-206ENST00000522020 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
MCPH1-206ENST00000522020 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
MCPH1-206ENST00000522020 ZNF219Q9P2Y4 722 aaPredicted RBP9.18□□□□□ -0.94
MCPH1-206ENST00000522020 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
MCPH1-206ENST00000522020 POTEMA6NI47 508 aa9.1□□□□□ -0.95
MCPH1-206ENST00000522020 GABBR2O75899 941 aa9.09□□□□□ -0.95
MCPH1-206ENST00000522020 REM2Q8IYK8 340 aaPredicted RBP9.05□□□□□ -0.96
MCPH1-206ENST00000522020 AKT1S1Q96B36 256 aa9.05□□□□□ -0.96
MCPH1-206ENST00000522020 POTEGQ6S5H5 508 aa9.03□□□□□ -0.96
MCPH1-206ENST00000522020 PITPNM1O00562 1244 aa8.99□□□□□ -0.97
MCPH1-206ENST00000522020 POTEIP0CG38 1075 aa8.96□□□□□ -0.98
MCPH1-206ENST00000522020 APLP2Q06481 763 aa8.92□□□□□ -0.98
MCPH1-206ENST00000522020 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
MCPH1-206ENST00000522020 POLA2Q14181 598 aa8.84□□□□□ -0.99
MCPH1-206ENST00000522020 PCDH10Q9P2E7 1040 aa8.83□□□□□ -1
MCPH1-206ENST00000522020 OTUD5Q96G74 571 aa8.82□□□□□ -1
MCPH1-206ENST00000522020 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
MCPH1-206ENST00000522020 NCBP3Q53F19 620 aaKnown RBP8.75□□□□□ -1.01
MCPH1-206ENST00000522020 SLC4A2P04920 1241 aa8.73□□□□□ -1.01
MCPH1-206ENST00000522020 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
MCPH1-206ENST00000522020 POTEB2H3BUK9 544 aa8.66□□□□□ -1.02
MCPH1-206ENST00000522020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.64□□□□□ -1.03
MCPH1-206ENST00000522020 HNRNPUL2Q1KMD3 747 aaKnown RBP8.64□□□□□ -1.03
MCPH1-206ENST00000522020 OSCARQ8IYS5 282 aa8.63□□□□□ -1.03
MCPH1-206ENST00000522020 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
MCPH1-206ENST00000522020 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
MCPH1-206ENST00000522020 DCBLD2Q96PD2 775 aa8.53□□□□□ -1.04
MCPH1-206ENST00000522020 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
MCPH1-206ENST00000522020 CHADLQ6NUI6 762 aa8.45□□□□□ -1.06
MCPH1-206ENST00000522020 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
MCPH1-206ENST00000522020 CDAN1Q8IWY9 1227 aa8.41□□□□□ -1.06
MCPH1-206ENST00000522020 CD44P16070 742 aaKnown RBP8.37□□□□□ -1.07
MCPH1-206ENST00000522020 ZBTB12Q9Y330 459 aaPredicted RBP8.37□□□□□ -1.07
MCPH1-206ENST00000522020 MMRN1Q13201 1228 aa8.34□□□□□ -1.07
MCPH1-206ENST00000522020 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
MCPH1-206ENST00000522020 CLCN6P51797 869 aa8.27□□□□□ -1.09
MCPH1-206ENST00000522020 SPDYE1Q8NFV5 336 aaPredicted RBP8.25□□□□□ -1.09
MCPH1-206ENST00000522020 GALR2O43603 387 aaPredicted RBP8.23□□□□□ -1.09
MCPH1-206ENST00000522020 SPNS2Q8IVW8 549 aa8.23□□□□□ -1.09
MCPH1-206ENST00000522020 PELP1Q8IZL8 1130 aaKnown RBP8.22□□□□□ -1.09
MCPH1-206ENST00000522020 ATF5Q9Y2D1 282 aaPredicted RBP8.15□□□□□ -1.1
MCPH1-206ENST00000522020 ZNF579Q8NAF0 562 aaKnown RBP8.13□□□□□ -1.11
MCPH1-206ENST00000522020 MAMSTRQ6ZN01 415 aa8.09□□□□□ -1.11
MCPH1-206ENST00000522020 FARP1Q9Y4F1 1045 aaPredicted RBP8.09□□□□□ -1.11
MCPH1-206ENST00000522020 SPDYE2BA6NHP3 402 aa8.08□□□□□ -1.12
MCPH1-206ENST00000522020 SPDYE6P0CI01 402 aa8.08□□□□□ -1.12
MCPH1-206ENST00000522020 SPDYE2Q495Y8 402 aa8.08□□□□□ -1.12
MCPH1-206ENST00000522020 METRNQ9UJH8 293 aa8.08□□□□□ -1.12
MCPH1-206ENST00000522020 ZRANB1Q9UGI0 708 aa8.07□□□□□ -1.12
MCPH1-206ENST00000522020 MYCNP04198 464 aaPredicted RBP8.05□□□□□ -1.12
MCPH1-206ENST00000522020 PRR29P0C7W0 189 aa8.04□□□□□ -1.12
MCPH1-206ENST00000522020 SCUBE2Q9NQ36 999 aa8.02□□□□□ -1.13
MCPH1-206ENST00000522020 ST18O60284 1047 aa7.95□□□□□ -1.14
MCPH1-206ENST00000522020 C7P10643 843 aa7.94□□□□□ -1.14
MCPH1-206ENST00000522020 SLC39A7Q92504 469 aa7.93□□□□□ -1.14
MCPH1-206ENST00000522020 PHF12Q96QT6 1004 aa7.92□□□□□ -1.14
MCPH1-206ENST00000522020 KCNA4P22459 653 aa7.88□□□□□ -1.15
MCPH1-206ENST00000522020 ASTLQ6HA08 431 aaPredicted RBP7.88□□□□□ -1.15
MCPH1-206ENST00000522020 SSUH2Q9Y2M2 353 aa7.88□□□□□ -1.15
MCPH1-206ENST00000522020 ATMINO43313 823 aaPredicted RBP7.87□□□□□ -1.15
MCPH1-206ENST00000522020 POTEFA5A3E0 1075 aa7.85□□□□□ -1.15
MCPH1-206ENST00000522020 ZNF692Q9BU19 519 aaPredicted RBP7.85□□□□□ -1.15
MCPH1-206ENST00000522020 MS4A3Q96HJ5 214 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms