RNA–Protein interactions for RNA: ENST00000521656.1

CHMP7-209, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-209ENST00000521656 AEBP2Q6ZN18 517 aaPredicted RBP15.08■□□□□ 0
CHMP7-209ENST00000521656 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
CHMP7-209ENST00000521656 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
CHMP7-209ENST00000521656 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.37
CHMP7-209ENST00000521656 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
CHMP7-209ENST00000521656 FOXD1Q16676 465 aa12.17□□□□□ -0.46
CHMP7-209ENST00000521656 MSH5O43196 834 aa11.67□□□□□ -0.54
CHMP7-209ENST00000521656 PIAS4Q8N2W9 510 aaPredicted RBP11.2□□□□□ -0.62
CHMP7-209ENST00000521656 PPP6R1Q9UPN7 881 aa10.85□□□□□ -0.67
CHMP7-209ENST00000521656 ADRA2BP18089 450 aa10.77□□□□□ -0.69
CHMP7-209ENST00000521656 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
CHMP7-209ENST00000521656 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
CHMP7-209ENST00000521656 DMRT2Q9Y5R5 561 aa10.18□□□□□ -0.78
CHMP7-209ENST00000521656 MAPK8IP2Q13387 824 aaPredicted RBP10.1□□□□□ -0.79
CHMP7-209ENST00000521656 RNF39Q9H2S5 420 aa9.89□□□□□ -0.83
CHMP7-209ENST00000521656 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
CHMP7-209ENST00000521656 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
CHMP7-209ENST00000521656 C1QBPQ07021 282 aaKnown RBP9.71□□□□□ -0.86
CHMP7-209ENST00000521656 POTEHQ6S545 545 aa9.71□□□□□ -0.86
CHMP7-209ENST00000521656 HOXD11P31277 338 aaPredicted RBP9.54□□□□□ -0.88
CHMP7-209ENST00000521656 DNAJC5BQ9UF47 199 aa9.37□□□□□ -0.91
CHMP7-209ENST00000521656 RNF216Q9NWF9 866 aaPredicted RBP9.28□□□□□ -0.92
CHMP7-209ENST00000521656 PPP4R3CPQ6ZMV5 832 aa9.19□□□□□ -0.94
CHMP7-209ENST00000521656 CNKSR2Q8WXI2 1034 aa9.19□□□□□ -0.94
CHMP7-209ENST00000521656 EHMT2Q96KQ7 1210 aa9.16□□□□□ -0.94
CHMP7-209ENST00000521656 SLC24A1O60721 1099 aa9.13□□□□□ -0.95
CHMP7-209ENST00000521656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHMP7-209ENST00000521656 DSG3P32926 999 aa9.03□□□□□ -0.96
CHMP7-209ENST00000521656 CAPN15O75808 1086 aa8.9□□□□□ -0.98
CHMP7-209ENST00000521656 SPINK5Q9NQ38 1064 aaPredicted RBP8.89□□□□□ -0.99
CHMP7-209ENST00000521656 U3KPZ7 1027 aaPredicted RBP8.81□□□□□ -1
CHMP7-209ENST00000521656 SP7Q8TDD2 431 aaPredicted RBP8.78□□□□□ -1
CHMP7-209ENST00000521656 CHRDL2Q6WN34 429 aa8.71□□□□□ -1.02
CHMP7-209ENST00000521656 KCNA4P22459 653 aa8.67□□□□□ -1.02
CHMP7-209ENST00000521656 ABCB7O75027 752 aa8.63□□□□□ -1.03
CHMP7-209ENST00000521656 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
CHMP7-209ENST00000521656 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
CHMP7-209ENST00000521656 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
CHMP7-209ENST00000521656 TRHP20396 242 aaPredicted RBP8.59□□□□□ -1.03
CHMP7-209ENST00000521656 ZNF219Q9P2Y4 722 aaPredicted RBP8.57□□□□□ -1.04
CHMP7-209ENST00000521656 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
CHMP7-209ENST00000521656 AMER1Q5JTC6 1135 aaPredicted RBP8.52□□□□□ -1.05
CHMP7-209ENST00000521656 NPM3O75607 178 aaKnown RBP8.51□□□□□ -1.05
CHMP7-209ENST00000521656 APLP2Q06481 763 aa8.5□□□□□ -1.05
CHMP7-209ENST00000521656 SLC4A1APQ9BWU0 796 aaKnown RBP8.42□□□□□ -1.06
CHMP7-209ENST00000521656 HAX1O00165 279 aa8.39□□□□□ -1.07
CHMP7-209ENST00000521656 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
CHMP7-209ENST00000521656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.33□□□□□ -1.08
CHMP7-209ENST00000521656 HNRNPUL2Q1KMD3 747 aaKnown RBP8.33□□□□□ -1.08
CHMP7-209ENST00000521656 SLC4A2P04920 1241 aa8.3□□□□□ -1.08
CHMP7-209ENST00000521656 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
CHMP7-209ENST00000521656 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
CHMP7-209ENST00000521656 SAMD1Q6SPF0 538 aaPredicted RBP8.25□□□□□ -1.09
CHMP7-209ENST00000521656 EVX2Q03828 476 aa8.23□□□□□ -1.09
CHMP7-209ENST00000521656 LHX8Q68G74 356 aa8.22□□□□□ -1.09
CHMP7-209ENST00000521656 POLA2Q14181 598 aa8.21□□□□□ -1.1
CHMP7-209ENST00000521656 FXR2P51116 673 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHMP7-209ENST00000521656 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
CHMP7-209ENST00000521656 PITPNM1O00562 1244 aa8.12□□□□□ -1.11
CHMP7-209ENST00000521656 GABBR2O75899 941 aa8.02□□□□□ -1.13
CHMP7-209ENST00000521656 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
CHMP7-209ENST00000521656 ZBTB22O15209 634 aa7.99□□□□□ -1.13
CHMP7-209ENST00000521656 OSCARQ8IYS5 282 aa7.98□□□□□ -1.13
CHMP7-209ENST00000521656 C19orf67A6NJJ6 358 aa7.96□□□□□ -1.14
CHMP7-209ENST00000521656 DAXXQ9UER7 740 aaPredicted RBP7.95□□□□□ -1.14
CHMP7-209ENST00000521656 PRKAR2AP13861 404 aaKnown RBP7.91□□□□□ -1.14
CHMP7-209ENST00000521656 PRKCSHP14314 528 aaPredicted RBP7.91□□□□□ -1.14
CHMP7-209ENST00000521656 MYCNP04198 464 aaPredicted RBP7.88□□□□□ -1.15
CHMP7-209ENST00000521656 BCANQ96GW7 911 aa7.85□□□□□ -1.15
CHMP7-209ENST00000521656 POTEIP0CG38 1075 aa7.84□□□□□ -1.15
CHMP7-209ENST00000521656 TAOK2Q9UL54 1235 aa7.81□□□□□ -1.16
CHMP7-209ENST00000521656 PLCB2Q00722 1185 aa7.79□□□□□ -1.16
CHMP7-209ENST00000521656 FOXD4L1Q9NU39 408 aa7.79□□□□□ -1.16
CHMP7-209ENST00000521656 POTEMA6NI47 508 aa7.77□□□□□ -1.17
CHMP7-209ENST00000521656 FKBP8Q14318 412 aa7.77□□□□□ -1.17
CHMP7-209ENST00000521656 ATF5Q9Y2D1 282 aaPredicted RBP7.75□□□□□ -1.17
CHMP7-209ENST00000521656 CLEC11AQ9Y240 323 aa7.74□□□□□ -1.17
CHMP7-209ENST00000521656 POTEGQ6S5H5 508 aa7.73□□□□□ -1.17
CHMP7-209ENST00000521656 SPDYE1Q8NFV5 336 aaPredicted RBP7.73□□□□□ -1.17
CHMP7-209ENST00000521656 ARXQ96QS3 562 aa7.73□□□□□ -1.17
CHMP7-209ENST00000521656 HAP1P54257 671 aaPredicted RBP7.72□□□□□ -1.17
CHMP7-209ENST00000521656 PCDH10Q9P2E7 1040 aa7.71□□□□□ -1.18
CHMP7-209ENST00000521656 SPDYE2BA6NHP3 402 aa7.7□□□□□ -1.18
CHMP7-209ENST00000521656 SPDYE6P0CI01 402 aa7.7□□□□□ -1.18
CHMP7-209ENST00000521656 SPDYE2Q495Y8 402 aa7.7□□□□□ -1.18
CHMP7-209ENST00000521656 TPRNQ4KMQ1 711 aa7.69□□□□□ -1.18
CHMP7-209ENST00000521656 OTUD5Q96G74 571 aa7.68□□□□□ -1.18
CHMP7-209ENST00000521656 CLCN6P51797 869 aa7.67□□□□□ -1.18
CHMP7-209ENST00000521656 CHADLQ6NUI6 762 aa7.67□□□□□ -1.18
CHMP7-209ENST00000521656 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
CHMP7-209ENST00000521656 DCBLD2Q96PD2 775 aa7.65□□□□□ -1.18
CHMP7-209ENST00000521656 CD44P16070 742 aaKnown RBP7.61□□□□□ -1.19
CHMP7-209ENST00000521656 TULP1O00294 542 aaPredicted RBP7.6□□□□□ -1.19
CHMP7-209ENST00000521656 VSIG10Q8N0Z9 540 aa7.58□□□□□ -1.2
CHMP7-209ENST00000521656 POTEB2H3BUK9 544 aa7.56□□□□□ -1.2
CHMP7-209ENST00000521656 ATXN8OSP0DMR3 200 aa7.53□□□□□ -1.2
CHMP7-209ENST00000521656 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
CHMP7-209ENST00000521656 PRR29P0C7W0 189 aa7.52□□□□□ -1.21
CHMP7-209ENST00000521656 SSUH2Q9Y2M2 353 aa7.51□□□□□ -1.21
CHMP7-209ENST00000521656 FBLN2P98095 1184 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms