RNA–Protein interactions for RNA: ENST00000486691.1

RNF11-202, Transcript of ring finger protein 11, humanhuman

TSL 2

Gene RNF11, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-202ENST00000486691 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
RNF11-202ENST00000486691 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
RNF11-202ENST00000486691 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
RNF11-202ENST00000486691 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
RNF11-202ENST00000486691 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
RNF11-202ENST00000486691 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
RNF11-202ENST00000486691 KCNA4P22459 653 aa14.4□□□□□ -0.1
RNF11-202ENST00000486691 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
RNF11-202ENST00000486691 SENP3Q9H4L4 574 aaPredicted RBP14.2□□□□□ -0.14
RNF11-202ENST00000486691 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
RNF11-202ENST00000486691 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
RNF11-202ENST00000486691 ADRA2BP18089 450 aa13.87□□□□□ -0.19
RNF11-202ENST00000486691 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
RNF11-202ENST00000486691 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
RNF11-202ENST00000486691 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
RNF11-202ENST00000486691 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
RNF11-202ENST00000486691 ZBTB22O15209 634 aa13.26□□□□□ -0.29
RNF11-202ENST00000486691 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
RNF11-202ENST00000486691 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
RNF11-202ENST00000486691 FOXD1Q16676 465 aa12.95□□□□□ -0.34
RNF11-202ENST00000486691 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
RNF11-202ENST00000486691 FKBP8Q14318 412 aa12.78□□□□□ -0.36
RNF11-202ENST00000486691 BCANQ96GW7 911 aa12.77□□□□□ -0.37
RNF11-202ENST00000486691 PLCB2Q00722 1185 aa12.74□□□□□ -0.37
RNF11-202ENST00000486691 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
RNF11-202ENST00000486691 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
RNF11-202ENST00000486691 PRKCSHP14314 528 aaPredicted RBP12.66□□□□□ -0.38
RNF11-202ENST00000486691 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
RNF11-202ENST00000486691 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
RNF11-202ENST00000486691 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
RNF11-202ENST00000486691 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
RNF11-202ENST00000486691 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
RNF11-202ENST00000486691 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
RNF11-202ENST00000486691 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
RNF11-202ENST00000486691 ARXQ96QS3 562 aa12.43□□□□□ -0.42
RNF11-202ENST00000486691 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
RNF11-202ENST00000486691 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
RNF11-202ENST00000486691 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
RNF11-202ENST00000486691 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
RNF11-202ENST00000486691 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
RNF11-202ENST00000486691 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
RNF11-202ENST00000486691 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
RNF11-202ENST00000486691 FBXO3Q9UK99 471 aa12.09□□□□□ -0.47
RNF11-202ENST00000486691 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
RNF11-202ENST00000486691 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
RNF11-202ENST00000486691 HOMEZQ8IX15 550 aa12.05□□□□□ -0.48
RNF11-202ENST00000486691 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
RNF11-202ENST00000486691 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.98□□□□□ -0.49
RNF11-202ENST00000486691 FBLN2P98095 1184 aa11.92□□□□□ -0.5
RNF11-202ENST00000486691 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
RNF11-202ENST00000486691 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
RNF11-202ENST00000486691 PKD2Q13563 968 aa11.83□□□□□ -0.52
RNF11-202ENST00000486691 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
RNF11-202ENST00000486691 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
RNF11-202ENST00000486691 MSH5O43196 834 aa11.8□□□□□ -0.52
RNF11-202ENST00000486691 TMEM132AQ24JP5 1023 aa11.8□□□□□ -0.52
RNF11-202ENST00000486691 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
RNF11-202ENST00000486691 NBR1Q14596 966 aa11.76□□□□□ -0.53
RNF11-202ENST00000486691 CFAP44Q96MT7 982 aa11.75□□□□□ -0.53
RNF11-202ENST00000486691 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
RNF11-202ENST00000486691 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.53
RNF11-202ENST00000486691 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
RNF11-202ENST00000486691 PROM2Q8N271 834 aa11.67□□□□□ -0.54
RNF11-202ENST00000486691 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
RNF11-202ENST00000486691 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
RNF11-202ENST00000486691 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.54
RNF11-202ENST00000486691 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNF11-202ENST00000486691 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
RNF11-202ENST00000486691 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
RNF11-202ENST00000486691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.53□□□□□ -0.56
RNF11-202ENST00000486691 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
RNF11-202ENST00000486691 HNRNPUL2Q1KMD3 747 aaKnown RBP11.53□□□□□ -0.56
RNF11-202ENST00000486691 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
RNF11-202ENST00000486691 DMRT2Q9Y5R5 561 aa11.52□□□□□ -0.57
RNF11-202ENST00000486691 PODXL2Q9NZ53 605 aa11.51□□□□□ -0.57
RNF11-202ENST00000486691 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
RNF11-202ENST00000486691 RGL2O15211 777 aa11.36□□□□□ -0.59
RNF11-202ENST00000486691 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
RNF11-202ENST00000486691 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
RNF11-202ENST00000486691 CHGAP10645 457 aaKnown RBP11.28□□□□□ -0.6
RNF11-202ENST00000486691 SUPT5HO00267 1087 aaKnown RBP11.27□□□□□ -0.61
RNF11-202ENST00000486691 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
RNF11-202ENST00000486691 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
RNF11-202ENST00000486691 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
RNF11-202ENST00000486691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.18□□□□□ -0.62
RNF11-202ENST00000486691 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
RNF11-202ENST00000486691 APLP2Q06481 763 aa11.13□□□□□ -0.63
RNF11-202ENST00000486691 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
RNF11-202ENST00000486691 BRPF1P55201 1214 aaPredicted RBP11.12□□□□□ -0.63
RNF11-202ENST00000486691 UBTFP17480 764 aaKnown RBP11.11□□□□□ -0.63
RNF11-202ENST00000486691 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
RNF11-202ENST00000486691 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
RNF11-202ENST00000486691 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
RNF11-202ENST00000486691 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
RNF11-202ENST00000486691 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
RNF11-202ENST00000486691 HRCP23327 699 aa11□□□□□ -0.65
RNF11-202ENST00000486691 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
RNF11-202ENST00000486691 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
RNF11-202ENST00000486691 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
RNF11-202ENST00000486691 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms