RNA–Protein interactions for RNA: ENST00000477715.5

SPATA9-205, Transcript of spermatogenesis associated 9, humanhuman

TSL 2

Gene SPATA9, Length 2,169 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-205ENST00000477715 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
SPATA9-205ENST00000477715 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
SPATA9-205ENST00000477715 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
SPATA9-205ENST00000477715 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
SPATA9-205ENST00000477715 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
SPATA9-205ENST00000477715 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
SPATA9-205ENST00000477715 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
SPATA9-205ENST00000477715 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
SPATA9-205ENST00000477715 KCNA4P22459 653 aa16.33■□□□□ 0.2
SPATA9-205ENST00000477715 DAXXQ9UER7 740 aaPredicted RBP16.32■□□□□ 0.2
SPATA9-205ENST00000477715 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
SPATA9-205ENST00000477715 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
SPATA9-205ENST00000477715 NISCHQ9Y2I1 1504 aa16.3■□□□□ 0.2
SPATA9-205ENST00000477715 PRKCSHP14314 528 aaPredicted RBP15.94■□□□□ 0.14
SPATA9-205ENST00000477715 TIMELESSQ9UNS1 1208 aa15.55■□□□□ 0.08
SPATA9-205ENST00000477715 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
SPATA9-205ENST00000477715 ARXQ96QS3 562 aa15.51■□□□□ 0.07
SPATA9-205ENST00000477715 TAOK2Q9UL54 1235 aa15.42■□□□□ 0.06
SPATA9-205ENST00000477715 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
SPATA9-205ENST00000477715 BCANQ96GW7 911 aa15.21■□□□□ 0.03
SPATA9-205ENST00000477715 APLP2Q06481 763 aa15.17■□□□□ 0.02
SPATA9-205ENST00000477715 TPRNQ4KMQ1 711 aa15.17■□□□□ 0.02
SPATA9-205ENST00000477715 ADRA2BP18089 450 aa15.11■□□□□ 0.01
SPATA9-205ENST00000477715 ZBTB22O15209 634 aa15.08■□□□□ 0
SPATA9-205ENST00000477715 PLCB2Q00722 1185 aa15.07■□□□□ 0
SPATA9-205ENST00000477715 HOMEZQ8IX15 550 aa15.04■□□□□ -0
SPATA9-205ENST00000477715 TTBK1Q5TCY1 1321 aaPredicted RBP14.94□□□□□ -0.02
SPATA9-205ENST00000477715 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
SPATA9-205ENST00000477715 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
SPATA9-205ENST00000477715 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
SPATA9-205ENST00000477715 GTF3C3Q9Y5Q9 886 aa14.83□□□□□ -0.04
SPATA9-205ENST00000477715 ERICH6Q7L0X2 663 aa14.83□□□□□ -0.04
SPATA9-205ENST00000477715 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
SPATA9-205ENST00000477715 PODXL2Q9NZ53 605 aa14.77□□□□□ -0.05
SPATA9-205ENST00000477715 MYT1Q01538 1121 aa14.65□□□□□ -0.06
SPATA9-205ENST00000477715 FKBP8Q14318 412 aa14.61□□□□□ -0.07
SPATA9-205ENST00000477715 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
SPATA9-205ENST00000477715 TMEM132AQ24JP5 1023 aa14.51□□□□□ -0.09
SPATA9-205ENST00000477715 VSIG10Q8N0Z9 540 aa14.51□□□□□ -0.09
SPATA9-205ENST00000477715 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
SPATA9-205ENST00000477715 NPM2Q86SE8 214 aaKnown RBP14.38□□□□□ -0.11
SPATA9-205ENST00000477715 C14orf37Q86TY3 774 aa14.37□□□□□ -0.11
SPATA9-205ENST00000477715 FBLN2P98095 1184 aa14.35□□□□□ -0.11
SPATA9-205ENST00000477715 EIF5BO60841 1220 aaKnown RBP14.24□□□□□ -0.13
SPATA9-205ENST00000477715 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
SPATA9-205ENST00000477715 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
SPATA9-205ENST00000477715 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
SPATA9-205ENST00000477715 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
SPATA9-205ENST00000477715 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
SPATA9-205ENST00000477715 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
SPATA9-205ENST00000477715 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
SPATA9-205ENST00000477715 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
SPATA9-205ENST00000477715 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
SPATA9-205ENST00000477715 HRCP23327 699 aa14.03□□□□□ -0.16
SPATA9-205ENST00000477715 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
SPATA9-205ENST00000477715 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
SPATA9-205ENST00000477715 PLEKHG5O94827 1062 aa13.83□□□□□ -0.19
SPATA9-205ENST00000477715 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
SPATA9-205ENST00000477715 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
SPATA9-205ENST00000477715 NBR1Q14596 966 aa13.76□□□□□ -0.21
SPATA9-205ENST00000477715 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
SPATA9-205ENST00000477715 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
SPATA9-205ENST00000477715 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
SPATA9-205ENST00000477715 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPATA9-205ENST00000477715 PKD2Q13563 968 aa13.63□□□□□ -0.23
SPATA9-205ENST00000477715 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
SPATA9-205ENST00000477715 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
SPATA9-205ENST00000477715 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
SPATA9-205ENST00000477715 IGSF3O75054 1194 aa13.47□□□□□ -0.25
SPATA9-205ENST00000477715 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
SPATA9-205ENST00000477715 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
SPATA9-205ENST00000477715 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
SPATA9-205ENST00000477715 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
SPATA9-205ENST00000477715 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
SPATA9-205ENST00000477715 SPRYD3Q8NCJ5 442 aa13.37□□□□□ -0.27
SPATA9-205ENST00000477715 ARID3AQ99856 593 aa13.36□□□□□ -0.27
SPATA9-205ENST00000477715 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
SPATA9-205ENST00000477715 CDK11BP21127 795 aaKnown RBP13.3□□□□□ -0.28
SPATA9-205ENST00000477715 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
SPATA9-205ENST00000477715 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
SPATA9-205ENST00000477715 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
SPATA9-205ENST00000477715 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.28
SPATA9-205ENST00000477715 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
SPATA9-205ENST00000477715 MYO15BQ96JP2 1530 aa13.24□□□□□ -0.29
SPATA9-205ENST00000477715 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
SPATA9-205ENST00000477715 PDIA4P13667 645 aaKnown RBP13.22□□□□□ -0.29
SPATA9-205ENST00000477715 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
SPATA9-205ENST00000477715 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
SPATA9-205ENST00000477715 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
SPATA9-205ENST00000477715 HSP90B1P14625 803 aaKnown RBP13.13□□□□□ -0.31
SPATA9-205ENST00000477715 FOXD1Q16676 465 aa13.12□□□□□ -0.31
SPATA9-205ENST00000477715 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
SPATA9-205ENST00000477715 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
SPATA9-205ENST00000477715 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
SPATA9-205ENST00000477715 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.31
SPATA9-205ENST00000477715 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
SPATA9-205ENST00000477715 RGL2O15211 777 aa13.05□□□□□ -0.32
SPATA9-205ENST00000477715 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
SPATA9-205ENST00000477715 NEUROD2Q15784 382 aa13.02□□□□□ -0.33
SPATA9-205ENST00000477715 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms