RNA–Protein interactions for RNA: ENST00000472828.1

CCDC141-205, Transcript of coiled-coil domain containing 141, humanhuman

TSL 3

Gene CCDC141, Length 771 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-205ENST00000472828 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
CCDC141-205ENST00000472828 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
CCDC141-205ENST00000472828 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
CCDC141-205ENST00000472828 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
CCDC141-205ENST00000472828 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
CCDC141-205ENST00000472828 FOXD1Q16676 465 aa17.36■□□□□ 0.37
CCDC141-205ENST00000472828 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
CCDC141-205ENST00000472828 ADRA2BP18089 450 aa16.76■□□□□ 0.27
CCDC141-205ENST00000472828 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
CCDC141-205ENST00000472828 MSH5O43196 834 aa15.89■□□□□ 0.13
CCDC141-205ENST00000472828 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CCDC141-205ENST00000472828 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
CCDC141-205ENST00000472828 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
CCDC141-205ENST00000472828 KCNA4P22459 653 aa15.18■□□□□ 0.02
CCDC141-205ENST00000472828 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
CCDC141-205ENST00000472828 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
CCDC141-205ENST00000472828 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
CCDC141-205ENST00000472828 NPM3O75607 178 aaKnown RBP14.85□□□□□ -0.03
CCDC141-205ENST00000472828 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
CCDC141-205ENST00000472828 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
CCDC141-205ENST00000472828 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
CCDC141-205ENST00000472828 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
CCDC141-205ENST00000472828 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
CCDC141-205ENST00000472828 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
CCDC141-205ENST00000472828 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
CCDC141-205ENST00000472828 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
CCDC141-205ENST00000472828 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
CCDC141-205ENST00000472828 ZBTB22O15209 634 aa14□□□□□ -0.17
CCDC141-205ENST00000472828 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
CCDC141-205ENST00000472828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCDC141-205ENST00000472828 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
CCDC141-205ENST00000472828 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
CCDC141-205ENST00000472828 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
CCDC141-205ENST00000472828 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
CCDC141-205ENST00000472828 AMER1Q5JTC6 1135 aaPredicted RBP13.55□□□□□ -0.24
CCDC141-205ENST00000472828 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
CCDC141-205ENST00000472828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
CCDC141-205ENST00000472828 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.25
CCDC141-205ENST00000472828 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
CCDC141-205ENST00000472828 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
CCDC141-205ENST00000472828 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
CCDC141-205ENST00000472828 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
CCDC141-205ENST00000472828 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
CCDC141-205ENST00000472828 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
CCDC141-205ENST00000472828 APLP2Q06481 763 aa13.28□□□□□ -0.28
CCDC141-205ENST00000472828 CAPN15O75808 1086 aa13.27□□□□□ -0.29
CCDC141-205ENST00000472828 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
CCDC141-205ENST00000472828 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
CCDC141-205ENST00000472828 ABCB7O75027 752 aa13.07□□□□□ -0.32
CCDC141-205ENST00000472828 DSG3P32926 999 aa13.05□□□□□ -0.32
CCDC141-205ENST00000472828 POLA2Q14181 598 aa13.02□□□□□ -0.33
CCDC141-205ENST00000472828 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
CCDC141-205ENST00000472828 FBLN2P98095 1184 aa12.72□□□□□ -0.37
CCDC141-205ENST00000472828 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
CCDC141-205ENST00000472828 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
CCDC141-205ENST00000472828 FKBP8Q14318 412 aa12.57□□□□□ -0.4
CCDC141-205ENST00000472828 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
CCDC141-205ENST00000472828 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
CCDC141-205ENST00000472828 BCANQ96GW7 911 aa12.45□□□□□ -0.42
CCDC141-205ENST00000472828 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
CCDC141-205ENST00000472828 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
CCDC141-205ENST00000472828 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
CCDC141-205ENST00000472828 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
CCDC141-205ENST00000472828 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
CCDC141-205ENST00000472828 PLCB2Q00722 1185 aa12.38□□□□□ -0.43
CCDC141-205ENST00000472828 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
CCDC141-205ENST00000472828 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
CCDC141-205ENST00000472828 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
CCDC141-205ENST00000472828 PROM2Q8N271 834 aa12.27□□□□□ -0.45
CCDC141-205ENST00000472828 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCDC141-205ENST00000472828 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
CCDC141-205ENST00000472828 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
CCDC141-205ENST00000472828 ARXQ96QS3 562 aa12.21□□□□□ -0.45
CCDC141-205ENST00000472828 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
CCDC141-205ENST00000472828 TPRNQ4KMQ1 711 aa12.13□□□□□ -0.47
CCDC141-205ENST00000472828 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
CCDC141-205ENST00000472828 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
CCDC141-205ENST00000472828 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
CCDC141-205ENST00000472828 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
CCDC141-205ENST00000472828 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
CCDC141-205ENST00000472828 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
CCDC141-205ENST00000472828 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
CCDC141-205ENST00000472828 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
CCDC141-205ENST00000472828 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
CCDC141-205ENST00000472828 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
CCDC141-205ENST00000472828 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
CCDC141-205ENST00000472828 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
CCDC141-205ENST00000472828 HOMEZQ8IX15 550 aa11.87□□□□□ -0.51
CCDC141-205ENST00000472828 MIER1Q8N108 512 aa11.83□□□□□ -0.52
CCDC141-205ENST00000472828 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
CCDC141-205ENST00000472828 IFNLR1Q8IU57 520 aaPredicted RBP11.8□□□□□ -0.52
CCDC141-205ENST00000472828 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
CCDC141-205ENST00000472828 GTF3C3Q9Y5Q9 886 aa11.8□□□□□ -0.52
CCDC141-205ENST00000472828 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
CCDC141-205ENST00000472828 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
CCDC141-205ENST00000472828 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC141-205ENST00000472828 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
CCDC141-205ENST00000472828 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
CCDC141-205ENST00000472828 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
CCDC141-205ENST00000472828 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms