RNA–Protein interactions for RNA: ENST00000466334.1

RND3-206, Transcript of Rho family GTPase 3, humanhuman

TSL 2

Gene RND3, Length 385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-206ENST00000466334 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
RND3-206ENST00000466334 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
RND3-206ENST00000466334 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
RND3-206ENST00000466334 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
RND3-206ENST00000466334 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
RND3-206ENST00000466334 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
RND3-206ENST00000466334 KCNA4P22459 653 aa14.25□□□□□ -0.13
RND3-206ENST00000466334 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
RND3-206ENST00000466334 ADRA2BP18089 450 aa13.98□□□□□ -0.17
RND3-206ENST00000466334 SLC24A1O60721 1099 aa13.81□□□□□ -0.2
RND3-206ENST00000466334 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
RND3-206ENST00000466334 PPP6R1Q9UPN7 881 aa13.63□□□□□ -0.23
RND3-206ENST00000466334 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
RND3-206ENST00000466334 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
RND3-206ENST00000466334 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
RND3-206ENST00000466334 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
RND3-206ENST00000466334 FOXD1Q16676 465 aa13.26□□□□□ -0.29
RND3-206ENST00000466334 ZBTB22O15209 634 aa13.15□□□□□ -0.3
RND3-206ENST00000466334 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
RND3-206ENST00000466334 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
RND3-206ENST00000466334 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
RND3-206ENST00000466334 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.37
RND3-206ENST00000466334 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
RND3-206ENST00000466334 FKBP8Q14318 412 aa12.51□□□□□ -0.41
RND3-206ENST00000466334 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
RND3-206ENST00000466334 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
RND3-206ENST00000466334 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
RND3-206ENST00000466334 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
RND3-206ENST00000466334 BCANQ96GW7 911 aa12.15□□□□□ -0.46
RND3-206ENST00000466334 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
RND3-206ENST00000466334 PRKCSHP14314 528 aaPredicted RBP12.12□□□□□ -0.47
RND3-206ENST00000466334 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
RND3-206ENST00000466334 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
RND3-206ENST00000466334 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
RND3-206ENST00000466334 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
RND3-206ENST00000466334 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.49
RND3-206ENST00000466334 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
RND3-206ENST00000466334 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
RND3-206ENST00000466334 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
RND3-206ENST00000466334 MSH5O43196 834 aa11.78□□□□□ -0.52
RND3-206ENST00000466334 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
RND3-206ENST00000466334 ATF5Q9Y2D1 282 aaPredicted RBP11.69□□□□□ -0.54
RND3-206ENST00000466334 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
RND3-206ENST00000466334 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
RND3-206ENST00000466334 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
RND3-206ENST00000466334 VASPP50552 380 aaPredicted RBP11.6□□□□□ -0.55
RND3-206ENST00000466334 PKD2Q13563 968 aa11.59□□□□□ -0.55
RND3-206ENST00000466334 ARXQ96QS3 562 aa11.58□□□□□ -0.56
RND3-206ENST00000466334 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
RND3-206ENST00000466334 FBLN2P98095 1184 aa11.56□□□□□ -0.56
RND3-206ENST00000466334 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
RND3-206ENST00000466334 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
RND3-206ENST00000466334 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
RND3-206ENST00000466334 PROM2Q8N271 834 aa11.54□□□□□ -0.56
RND3-206ENST00000466334 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
RND3-206ENST00000466334 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
RND3-206ENST00000466334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
RND3-206ENST00000466334 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
RND3-206ENST00000466334 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
RND3-206ENST00000466334 ERICH6Q7L0X2 663 aa11.48□□□□□ -0.57
RND3-206ENST00000466334 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
RND3-206ENST00000466334 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
RND3-206ENST00000466334 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
RND3-206ENST00000466334 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
RND3-206ENST00000466334 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
RND3-206ENST00000466334 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
RND3-206ENST00000466334 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
RND3-206ENST00000466334 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
RND3-206ENST00000466334 ECM2O94769 699 aaPredicted RBP11.27□□□□□ -0.61
RND3-206ENST00000466334 NBR1Q14596 966 aa11.27□□□□□ -0.61
RND3-206ENST00000466334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.27□□□□□ -0.61
RND3-206ENST00000466334 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
RND3-206ENST00000466334 HOMEZQ8IX15 550 aa11.25□□□□□ -0.61
RND3-206ENST00000466334 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
RND3-206ENST00000466334 SPOCK2Q92563 424 aa11.22□□□□□ -0.61
RND3-206ENST00000466334 TMEM132AQ24JP5 1023 aa11.2□□□□□ -0.62
RND3-206ENST00000466334 RGL2O15211 777 aa11.14□□□□□ -0.63
RND3-206ENST00000466334 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
RND3-206ENST00000466334 APLP2Q06481 763 aa11.08□□□□□ -0.64
RND3-206ENST00000466334 C14orf37Q86TY3 774 aa11.05□□□□□ -0.64
RND3-206ENST00000466334 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
RND3-206ENST00000466334 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
RND3-206ENST00000466334 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
RND3-206ENST00000466334 HS6ST3Q8IZP7 471 aa10.92□□□□□ -0.66
RND3-206ENST00000466334 PLCD3Q8N3E9 789 aa10.85□□□□□ -0.67
RND3-206ENST00000466334 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
RND3-206ENST00000466334 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
RND3-206ENST00000466334 POLA2Q14181 598 aa10.79□□□□□ -0.68
RND3-206ENST00000466334 GTPBP6O43824 516 aaPredicted RBP10.77□□□□□ -0.69
RND3-206ENST00000466334 MIER1Q8N108 512 aa10.76□□□□□ -0.69
RND3-206ENST00000466334 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
RND3-206ENST00000466334 PODXL2Q9NZ53 605 aa10.74□□□□□ -0.69
RND3-206ENST00000466334 RANGAP1P46060 587 aaPredicted RBP10.73□□□□□ -0.69
RND3-206ENST00000466334 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
RND3-206ENST00000466334 BRPF1P55201 1214 aaPredicted RBP10.7□□□□□ -0.7
RND3-206ENST00000466334 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
RND3-206ENST00000466334 ZBTB47Q9UFB7 747 aaPredicted RBP10.69□□□□□ -0.7
RND3-206ENST00000466334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.7
RND3-206ENST00000466334 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
RND3-206ENST00000466334 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms