RNA–Protein interactions for RNA: ENST00000461454.1

CIR1-203, Transcript of corepressor interacting with RBPJ, 1, humanhuman

TSL 2

Gene CIR1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-203ENST00000461454 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
CIR1-203ENST00000461454 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
CIR1-203ENST00000461454 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
CIR1-203ENST00000461454 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
CIR1-203ENST00000461454 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
CIR1-203ENST00000461454 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
CIR1-203ENST00000461454 FOXD1Q16676 465 aa15.71■□□□□ 0.11
CIR1-203ENST00000461454 ADRA2BP18089 450 aa15.15■□□□□ 0.02
CIR1-203ENST00000461454 MSH5O43196 834 aa15.11■□□□□ 0.01
CIR1-203ENST00000461454 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
CIR1-203ENST00000461454 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
CIR1-203ENST00000461454 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
CIR1-203ENST00000461454 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
CIR1-203ENST00000461454 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
CIR1-203ENST00000461454 KCNA4P22459 653 aa13.88□□□□□ -0.19
CIR1-203ENST00000461454 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
CIR1-203ENST00000461454 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
CIR1-203ENST00000461454 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
CIR1-203ENST00000461454 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
CIR1-203ENST00000461454 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
CIR1-203ENST00000461454 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
CIR1-203ENST00000461454 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
CIR1-203ENST00000461454 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
CIR1-203ENST00000461454 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
CIR1-203ENST00000461454 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
CIR1-203ENST00000461454 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
CIR1-203ENST00000461454 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
CIR1-203ENST00000461454 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
CIR1-203ENST00000461454 POTEHQ6S545 545 aa12.84□□□□□ -0.35
CIR1-203ENST00000461454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
CIR1-203ENST00000461454 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
CIR1-203ENST00000461454 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
CIR1-203ENST00000461454 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
CIR1-203ENST00000461454 ZBTB22O15209 634 aa12.69□□□□□ -0.38
CIR1-203ENST00000461454 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
CIR1-203ENST00000461454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
CIR1-203ENST00000461454 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
CIR1-203ENST00000461454 APLP2Q06481 763 aa12.56□□□□□ -0.4
CIR1-203ENST00000461454 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
CIR1-203ENST00000461454 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
CIR1-203ENST00000461454 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
CIR1-203ENST00000461454 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
CIR1-203ENST00000461454 ZNF219Q9P2Y4 722 aaPredicted RBP12.23□□□□□ -0.45
CIR1-203ENST00000461454 CAPN15O75808 1086 aa12.15□□□□□ -0.46
CIR1-203ENST00000461454 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
CIR1-203ENST00000461454 ATF5Q9Y2D1 282 aaPredicted RBP12.08□□□□□ -0.48
CIR1-203ENST00000461454 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
CIR1-203ENST00000461454 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
CIR1-203ENST00000461454 POLA2Q14181 598 aa11.91□□□□□ -0.5
CIR1-203ENST00000461454 FBLN2P98095 1184 aa11.88□□□□□ -0.51
CIR1-203ENST00000461454 DSG3P32926 999 aa11.85□□□□□ -0.51
CIR1-203ENST00000461454 ABCB7O75027 752 aa11.83□□□□□ -0.52
CIR1-203ENST00000461454 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
CIR1-203ENST00000461454 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
CIR1-203ENST00000461454 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
CIR1-203ENST00000461454 FKBP8Q14318 412 aa11.62□□□□□ -0.55
CIR1-203ENST00000461454 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
CIR1-203ENST00000461454 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
CIR1-203ENST00000461454 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
CIR1-203ENST00000461454 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
CIR1-203ENST00000461454 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
CIR1-203ENST00000461454 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
CIR1-203ENST00000461454 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
CIR1-203ENST00000461454 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
CIR1-203ENST00000461454 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
CIR1-203ENST00000461454 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
CIR1-203ENST00000461454 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
CIR1-203ENST00000461454 PROM2Q8N271 834 aa11.33□□□□□ -0.6
CIR1-203ENST00000461454 AKT1S1Q96B36 256 aa11.3□□□□□ -0.6
CIR1-203ENST00000461454 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
CIR1-203ENST00000461454 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
CIR1-203ENST00000461454 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
CIR1-203ENST00000461454 ARXQ96QS3 562 aa11.25□□□□□ -0.61
CIR1-203ENST00000461454 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
CIR1-203ENST00000461454 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
CIR1-203ENST00000461454 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
CIR1-203ENST00000461454 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
CIR1-203ENST00000461454 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
CIR1-203ENST00000461454 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
CIR1-203ENST00000461454 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
CIR1-203ENST00000461454 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
CIR1-203ENST00000461454 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
CIR1-203ENST00000461454 BCANQ96GW7 911 aa11.01□□□□□ -0.65
CIR1-203ENST00000461454 ZBTB47Q9UFB7 747 aaPredicted RBP11.01□□□□□ -0.65
CIR1-203ENST00000461454 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
CIR1-203ENST00000461454 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
CIR1-203ENST00000461454 PRR29P0C7W0 189 aa10.99□□□□□ -0.65
CIR1-203ENST00000461454 MYT1Q01538 1121 aa10.96□□□□□ -0.65
CIR1-203ENST00000461454 MIER1Q8N108 512 aa10.96□□□□□ -0.65
CIR1-203ENST00000461454 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
CIR1-203ENST00000461454 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
CIR1-203ENST00000461454 RANGAP1P46060 587 aaPredicted RBP10.93□□□□□ -0.66
CIR1-203ENST00000461454 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
CIR1-203ENST00000461454 HOMEZQ8IX15 550 aa10.9□□□□□ -0.66
CIR1-203ENST00000461454 HAX1O00165 279 aa10.87□□□□□ -0.67
CIR1-203ENST00000461454 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
CIR1-203ENST00000461454 TULP1O00294 542 aaPredicted RBP10.86□□□□□ -0.67
CIR1-203ENST00000461454 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
CIR1-203ENST00000461454 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
CIR1-203ENST00000461454 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms