RNA–Protein interactions for RNA: ENST00000430465.1

HFM1-203, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 1 (best)

Gene HFM1, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-203ENST00000430465 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
HFM1-203ENST00000430465 POTEDQ86YR6 584 aa15.84■□□□□ 0.13
HFM1-203ENST00000430465 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
HFM1-203ENST00000430465 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
HFM1-203ENST00000430465 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
HFM1-203ENST00000430465 FOXD1Q16676 465 aa13.49□□□□□ -0.25
HFM1-203ENST00000430465 MSH5O43196 834 aa13.48□□□□□ -0.25
HFM1-203ENST00000430465 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
HFM1-203ENST00000430465 PIAS4Q8N2W9 510 aaPredicted RBP12.21□□□□□ -0.45
HFM1-203ENST00000430465 POTEHQ6S545 545 aa12.11□□□□□ -0.47
HFM1-203ENST00000430465 RNF39Q9H2S5 420 aa11.23□□□□□ -0.61
HFM1-203ENST00000430465 PPP6R1Q9UPN7 881 aa11.2□□□□□ -0.62
HFM1-203ENST00000430465 DMRT2Q9Y5R5 561 aa11.14□□□□□ -0.63
HFM1-203ENST00000430465 ADRA2BP18089 450 aa11.09□□□□□ -0.63
HFM1-203ENST00000430465 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
HFM1-203ENST00000430465 MAPK8IP2Q13387 824 aaPredicted RBP10.66□□□□□ -0.7
HFM1-203ENST00000430465 DCAF8L1A6NGE4 600 aa10.64□□□□□ -0.71
HFM1-203ENST00000430465 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
HFM1-203ENST00000430465 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
HFM1-203ENST00000430465 PLPPR3Q6T4P5 718 aa10.51□□□□□ -0.73
HFM1-203ENST00000430465 SCAF1Q9H7N4 1312 aaKnown RBP10.47□□□□□ -0.73
HFM1-203ENST00000430465 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
HFM1-203ENST00000430465 HOXD11P31277 338 aaPredicted RBP10.08□□□□□ -0.8
HFM1-203ENST00000430465 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
HFM1-203ENST00000430465 DSG3P32926 999 aa9.92□□□□□ -0.82
HFM1-203ENST00000430465 LHX8Q68G74 356 aa9.9□□□□□ -0.82
HFM1-203ENST00000430465 RBM42Q9BTD8 480 aaKnown RBP9.69□□□□□ -0.86
HFM1-203ENST00000430465 HAX1O00165 279 aa9.66□□□□□ -0.86
HFM1-203ENST00000430465 PCDH10Q9P2E7 1040 aa9.58□□□□□ -0.88
HFM1-203ENST00000430465 CAPN15O75808 1086 aa9.56□□□□□ -0.88
HFM1-203ENST00000430465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.88
HFM1-203ENST00000430465 RNF216Q9NWF9 866 aaPredicted RBP9.56□□□□□ -0.88
HFM1-203ENST00000430465 SPINK5Q9NQ38 1064 aaPredicted RBP9.39□□□□□ -0.91
HFM1-203ENST00000430465 POTEMA6NI47 508 aa9.38□□□□□ -0.91
HFM1-203ENST00000430465 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
HFM1-203ENST00000430465 POTEGQ6S5H5 508 aa9.29□□□□□ -0.92
HFM1-203ENST00000430465 PPP4R3CPQ6ZMV5 832 aa9.27□□□□□ -0.93
HFM1-203ENST00000430465 EVX2Q03828 476 aa9.26□□□□□ -0.93
HFM1-203ENST00000430465 CNKSR2Q8WXI2 1034 aa9.22□□□□□ -0.93
HFM1-203ENST00000430465 GABBR2O75899 941 aa9.11□□□□□ -0.95
HFM1-203ENST00000430465 U3KPZ7 1027 aaPredicted RBP9.1□□□□□ -0.95
HFM1-203ENST00000430465 ABCB7O75027 752 aa9.09□□□□□ -0.95
HFM1-203ENST00000430465 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
HFM1-203ENST00000430465 KCNA4P22459 653 aa9.05□□□□□ -0.96
HFM1-203ENST00000430465 AKT1S1Q96B36 256 aa9.05□□□□□ -0.96
HFM1-203ENST00000430465 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
HFM1-203ENST00000430465 NCBP3Q53F19 620 aaKnown RBP9.01□□□□□ -0.97
HFM1-203ENST00000430465 APLP2Q06481 763 aa9□□□□□ -0.97
HFM1-203ENST00000430465 TRHP20396 242 aaPredicted RBP8.96□□□□□ -0.97
HFM1-203ENST00000430465 NPM3O75607 178 aaKnown RBP8.9□□□□□ -0.98
HFM1-203ENST00000430465 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
HFM1-203ENST00000430465 REM2Q8IYK8 340 aaPredicted RBP8.87□□□□□ -0.99
HFM1-203ENST00000430465 OTUD5Q96G74 571 aa8.84□□□□□ -1
HFM1-203ENST00000430465 POTEIP0CG38 1075 aa8.82□□□□□ -1
HFM1-203ENST00000430465 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
HFM1-203ENST00000430465 CLCN6P51797 869 aa8.69□□□□□ -1.02
HFM1-203ENST00000430465 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
HFM1-203ENST00000430465 DCBLD2Q96PD2 775 aa8.56□□□□□ -1.04
HFM1-203ENST00000430465 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
HFM1-203ENST00000430465 MMRN1Q13201 1228 aa8.54□□□□□ -1.04
HFM1-203ENST00000430465 PRKAR2AP13861 404 aaKnown RBP8.53□□□□□ -1.04
HFM1-203ENST00000430465 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
HFM1-203ENST00000430465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.5□□□□□ -1.05
HFM1-203ENST00000430465 HNRNPUL2Q1KMD3 747 aaKnown RBP8.5□□□□□ -1.05
HFM1-203ENST00000430465 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
HFM1-203ENST00000430465 POTEB2H3BUK9 544 aa8.44□□□□□ -1.06
HFM1-203ENST00000430465 SLC4A2P04920 1241 aa8.42□□□□□ -1.06
HFM1-203ENST00000430465 MAMSTRQ6ZN01 415 aa8.39□□□□□ -1.07
HFM1-203ENST00000430465 SPNS2Q8IVW8 549 aa8.38□□□□□ -1.07
HFM1-203ENST00000430465 ZBTB22O15209 634 aa8.37□□□□□ -1.07
HFM1-203ENST00000430465 POLA2Q14181 598 aa8.36□□□□□ -1.07
HFM1-203ENST00000430465 FOXD4L1Q9NU39 408 aa8.35□□□□□ -1.07
HFM1-203ENST00000430465 EHMT2Q96KQ7 1210 aa8.34□□□□□ -1.07
HFM1-203ENST00000430465 SAMD1Q6SPF0 538 aaPredicted RBP8.31□□□□□ -1.08
HFM1-203ENST00000430465 CSRNP3Q8WYN3 585 aa8.31□□□□□ -1.08
HFM1-203ENST00000430465 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
HFM1-203ENST00000430465 MYCNP04198 464 aaPredicted RBP8.22□□□□□ -1.09
HFM1-203ENST00000430465 CD44P16070 742 aaKnown RBP8.17□□□□□ -1.1
HFM1-203ENST00000430465 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.11
HFM1-203ENST00000430465 OSCARQ8IYS5 282 aa8.11□□□□□ -1.11
HFM1-203ENST00000430465 SPDYE1Q8NFV5 336 aaPredicted RBP8.09□□□□□ -1.11
HFM1-203ENST00000430465 ATXN8OSP0DMR3 200 aa8.07□□□□□ -1.12
HFM1-203ENST00000430465 POTEJP0CG39 1038 aa8.04□□□□□ -1.12
HFM1-203ENST00000430465 ZNF579Q8NAF0 562 aaKnown RBP8.03□□□□□ -1.12
HFM1-203ENST00000430465 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
HFM1-203ENST00000430465 ATF5Q9Y2D1 282 aaPredicted RBP8□□□□□ -1.13
HFM1-203ENST00000430465 C7P10643 843 aa7.97□□□□□ -1.13
HFM1-203ENST00000430465 CHADLQ6NUI6 762 aa7.95□□□□□ -1.14
HFM1-203ENST00000430465 SLC39A7Q92504 469 aa7.95□□□□□ -1.14
HFM1-203ENST00000430465 METRNQ9UJH8 293 aa7.95□□□□□ -1.14
HFM1-203ENST00000430465 GALR2O43603 387 aaPredicted RBP7.9□□□□□ -1.14
HFM1-203ENST00000430465 PELP1Q8IZL8 1130 aaKnown RBP7.88□□□□□ -1.15
HFM1-203ENST00000430465 ST18O60284 1047 aa7.86□□□□□ -1.15
HFM1-203ENST00000430465 SPDYE2BA6NHP3 402 aa7.81□□□□□ -1.16
HFM1-203ENST00000430465 SPDYE6P0CI01 402 aa7.81□□□□□ -1.16
HFM1-203ENST00000430465 SPDYE2Q495Y8 402 aa7.81□□□□□ -1.16
HFM1-203ENST00000430465 FARP1Q9Y4F1 1045 aaPredicted RBP7.81□□□□□ -1.16
HFM1-203ENST00000430465 TMEM121BQ9BXQ6 578 aaPredicted RBP7.8□□□□□ -1.16
HFM1-203ENST00000430465 ZRANB1Q9UGI0 708 aa7.8□□□□□ -1.16
HFM1-203ENST00000430465 ASTLQ6HA08 431 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms