RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 AGTRAPQ6RW13 159 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 CPSF7Q8N684 471 aaKnown RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 POU5F2Q8N7G0 328 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 TMEM145Q8NBT3 493 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 PHC3Q8NDX5 983 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 OR5AR1Q8NGP9 310 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 ATP6V1E2Q96A05 226 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 PDXPQ96GD0 296 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 CCDC138Q96M89 665 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 HBEGFQ99075 208 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 NTMT1Q9BV86 223 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 TBC1D17Q9HA65 648 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 INTS7Q9NVH2 962 aaKnown RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 WSB2Q9NYS7 404 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 LNPEPQ9UIQ6 1025 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 KCNK6Q9Y257 313 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 WDR37Q9Y2I8 494 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 CFAP20Q9Y6A4 193 aaKnown RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 SLCO1B1Q9Y6L6 691 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 FPGTO14772 594 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 HOXC4P09017 264 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-232ENST00000641947 MAPK9P45984 424 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 PXNP49023 591 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-232ENST00000641947 KCNJ2P63252 427 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 PLOD1Q02809 727 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-232ENST00000641947 DMPKQ09013 629 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 NFATC4Q14934 902 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 DUS1LQ6P1R4 473 aaKnown RBP17.1■□□□□ 0.33
PHGDH-232ENST00000641947 RINLQ6ZS11 566 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 MILR1Q7Z6M3 343 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 SNX31Q8N9S9 440 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 METTL6Q8TCB7 284 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 ZNF480Q8WV37 535 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 OR1E3Q8WZA6 343 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 OR4K3Q96R72 315 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 TIMM29Q9BSF4 260 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 LRMDAQ9H2I8 198 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 ARHGEF17Q96PE2 2063 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-232ENST00000641947 KCNE1BA0A087WTH5 132 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 PRSS38A1L453 326 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 PABPN1LA6NDY0 278 aaKnown RBP17.1■□□□□ 0.33
PHGDH-232ENST00000641947 FFAR3O14843 346 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 GIPC1O14908 333 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 GPR42O15529 346 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 CALB2P22676 271 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 GNPDA1P46926 289 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 NAA25Q14CX7 972 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 GALNT13Q8IUC8 556 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 KLHDC8AQ8IYD2 350 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 OR56A3Q8NH54 315 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 BIRC7Q96CA5 298 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 SHDQ96IW2 340 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 MIPEPQ99797 713 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 GPR174Q9BXC1 333 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 RMI1Q9H9A7 625 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 DNAJC11Q9NVH1 559 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 TAGLN3Q9UI15 199 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 MOSPD1Q9UJG1 213 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 PLAGL1Q9UM63 463 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 CAPN7Q9Y6W3 813 aa17.1■□□□□ 0.33
PHGDH-232ENST00000641947 GON4LQ3T8J9 2241 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 TDRD6O60522 2096 aaKnown RBP17.09■□□□□ 0.33
PHGDH-232ENST00000641947 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 ATP5HO75947 161 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 EBLN1P0CF75 366 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 PRR35P0CG20 571 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-232ENST00000641947 HGFP14210 728 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 PIK3R1P27986 724 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 NAE1Q13564 534 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 ABRAXAS2Q15018 415 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 TBCCQ15814 346 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 KIAA0895LQ68EN5 471 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 TTC23LQ6PF05 361 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 UNC5DQ6UXZ4 953 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 THOC6Q86W42 341 aaKnown RBP17.09■□□□□ 0.33
PHGDH-232ENST00000641947 LRRC56Q8IYG6 542 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-232ENST00000641947 KLHL29Q96CT2 875 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 FARSBQ9NSD9 589 aaKnown RBP17.09■□□□□ 0.33
PHGDH-232ENST00000641947 TRPS1Q9UHF7 1281 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 ASF1AQ9Y294 204 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 STK38LQ9Y2H1 464 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 GPSM3Q9Y4H4 160 aa17.09■□□□□ 0.33
PHGDH-232ENST00000641947 SNRNP200O75643 2136 aaKnown RBP17.08■□□□□ 0.33
PHGDH-232ENST00000641947 TP53BP1Q12888 1972 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-232ENST00000641947 CD6P30203 668 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 CCR3P51677 355 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 CCR5P51681 352 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 CLCNKAP51800 687 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 CDC16Q13042 620 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 FASTKQ14296 549 aaKnown RBP17.08■□□□□ 0.33
PHGDH-232ENST00000641947 CAPRIN2Q6IMN6 1127 aaKnown RBP17.08■□□□□ 0.33
PHGDH-232ENST00000641947 ENPP7Q6UWV6 458 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 Q6ZSR9 355 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 PJA1Q8NG27 643 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 OR9A1PQ8NGU1 263 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 TFGQ92734 400 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-232ENST00000641947 UTP4Q969X6 686 aaKnown RBP17.08■□□□□ 0.33
PHGDH-232ENST00000641947 TUBGCP3Q96CW5 907 aa17.08■□□□□ 0.33
PHGDH-232ENST00000641947 MED8Q96G25 268 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms