RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	EBNA1BP2	Q99848	306 aa	Known RBP	14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	NAT9	Q9BTE0	207 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	TWSG1	Q9GZX9	223 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	FBXO6	Q9NRD1	293 aa	Predicted RBP	14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	LATS2	Q9NRM7	1088 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	SPHK1	Q9NYA1	384 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	MRFAP1	Q9Y605	127 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	ZNF891	A8MT65	544 aa	Predicted RBP	14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	ISM1	B1AKI9	464 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	SMAP	O00193	183 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	TTI1	O43156	1089 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	BANF1	O75531	89 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	SCRG1	O75711	98 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	C1orf105	O95561	183 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	TTC4	O95801	387 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	ITGB2	P05107	769 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	F7	P08709	466 aa	Predicted RBP	14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	CCNYL3	P0C7X3	344 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	MSL3P1	P0C860	447 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	ATP5D	P30049	168 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	SLC1A2	P43004	574 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	CYP4F2	P78329	520 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	GRB7	Q14451	532 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	GBX1	Q14549	363 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	CRYM	Q14894	314 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	BBS9	Q3SYG4	887 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	MSS51	Q4VC12	460 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	HSP90AA5P	Q58FG0	334 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	TRIM73	Q86UV7	250 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	KCNMB4	Q86W47	210 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	TMEM126B	Q8IUX1	230 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	PDIK1L	Q8N165	341 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	C17orf53	Q8N3J3	647 aa	Predicted RBP	14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	ZBTB2	Q8N680	514 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	FLVCR1-AS1	Q8TAF5	88 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	RAD51AP1	Q96B01	352 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	TRIM51	Q9BSJ1	452 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	FAM167B	Q9BTA0	163 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	MENT	Q9BUN1	341 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	KLHL25	Q9H0H3	589 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	CCDC68	Q9H2F9	335 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	GALP	Q9UBC7	116 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	CIDEB	Q9UHD4	219 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	IL17B	Q9UHF5	180 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	FBXO5	Q9UKT4	447 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	PADI1	Q9ULC6	663 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939	NFS1	Q9Y697	457 aa		14.53	□□□□□ -0.08
PHGDH-231	ENST00000641939		A0A0J9YY10	115 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	TMEM150C	B9EJG8	249 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	RASGRF2	O14827	1237 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	CPNE3	O75131	537 aa	Known RBP	14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	NTRK1	P04629	796 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	CD9	P21926	228 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	PEBP1	P30086	187 aa	Known RBP	14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	CASQ1	P31415	396 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	DLST	P36957	453 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	CCNF	P41002	786 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	SLC5A12	Q1EHB4	618 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	SPANXN3	Q5MJ09	141 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	HIBCH	Q6NVY1	386 aa	Predicted RBP	14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	CNST	Q6PJW8	725 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	C19orf47	Q8N9M1	422 aa	Known RBP	14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	LINC01555	Q8NAE3	123 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	OR2L8	Q8NGY9	312 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	GABPB2	Q8TAK5	448 aa	Predicted RBP	14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	EXTL1	Q92935	676 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	SLC22A18	Q96BI1	424 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	TCTN2	Q96GX1	697 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	SNF8	Q96H20	258 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	IL17F	Q96PD4	163 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	KRT12	Q99456	494 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	RAB11FIP5	Q9BXF6	653 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	CHRNA10	Q9GZZ6	450 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	LHX9	Q9NQ69	397 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	IARS2	Q9NSE4	1012 aa	Known RBP	14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	KLHL42	Q9P2K6	505 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	CROT	Q9UKG9	612 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	SLC39A10	Q9ULF5	831 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	RUVBL2	Q9Y230	463 aa	Known RBP	14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	PCDHB3	Q9Y5E6	796 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	COMMD10	Q9Y6G5	202 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	FER1L5	A0AVI2	2057 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	HEATR5B	Q9P2D3	2071 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	BSN	Q9UPA5	3926 aa		14.52	□□□□□ -0.09
PHGDH-231	ENST00000641939	SEC31A	O94979	1220 aa	Known RBP	14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	MATN4	O95460	622 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	ERVK-10	P10266	1014 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	F8A1	P23610	371 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	BDKRB1	P46663	353 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	CLCN7	P51798	805 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	ITGA8	P53708	1063 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	ETF1	P62495	437 aa	Known RBP	14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	MPP1	Q00013	466 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	MC1R	Q01726	317 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	ZIC1	Q15915	447 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	ZNF549	Q6P9A3	640 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	CDHR3	Q6ZTQ4	885 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	IGDCC3	Q8IVU1	814 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	RAB42	Q8N4Z0	105 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	C2orf73	Q8N5S3	287 aa	Predicted RBP	14.51	□□□□□ -0.09

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms