RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ESAMQ96AP7 390 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 CAMK1GQ96NX5 476 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 OXSMQ9NWU1 459 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 OGFRQ9NZT2 677 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 ARHGEF17Q96PE2 2063 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-230ENST00000641927 PCDH15Q96QU1 1955 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 LNP1A1A4G5 178 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 MYO1CO00159 1063 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 SLC16A8O95907 504 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 LMNAP02545 664 aaKnown RBP16.98■□□□□ 0.31
PHGDH-230ENST00000641927 XRCC1P18887 633 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-230ENST00000641927 MAZP56270 477 aaKnown RBP16.98■□□□□ 0.31
PHGDH-230ENST00000641927 CDKL1Q00532 357 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 GUCY1A3Q02108 690 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 SPEM2Q0P670 501 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 PLCL1Q15111 1095 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 LIPMQ5VYY2 423 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 TTC19Q6DKK2 380 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-230ENST00000641927 SULT1C3Q6IMI6 304 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 SYTL1Q8IYJ3 562 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 RAB42Q8N4Z0 105 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 ATL1Q8WXF7 558 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 JPH3Q8WXH2 748 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-230ENST00000641927 RHBDF1Q96CC6 855 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 IL17FQ96PD4 163 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 ATG10Q9H0Y0 220 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 STN1Q9H668 368 aaKnown RBP16.98■□□□□ 0.31
PHGDH-230ENST00000641927 ACSS2Q9NR19 701 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 ABCF3Q9NUQ8 709 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 POT1Q9NUX5 634 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 LNPEPQ9UIQ6 1025 aa16.98■□□□□ 0.31
PHGDH-230ENST00000641927 KDM1AO60341 852 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 TRIM13O60858 407 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 SIX3O95343 332 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 ALPPL2P10696 532 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 BGNP21810 368 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 EEF1DP29692 281 aaKnown RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 HSPA7P48741 367 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 AGTR2P50052 363 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 HNMTP50135 292 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 PRKAA2P54646 552 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 NFKB2Q00653 900 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 HHEXQ03014 270 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 ASPHQ12797 758 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 TSTA3Q13630 321 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 SETDB1Q15047 1291 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 SF3A2Q15428 464 aaKnown RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 CHI3L2Q15782 390 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 CFAP157Q5JU67 520 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 C6orf132Q5T0Z8 1188 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 ZCCHC23Q6ZST2 131 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 TCAIMQ8N3R3 496 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 CCNYL1Q8N7R7 359 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 OR52E1Q8NGJ3 308 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 MED8Q96G25 268 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 SLC40A1Q9NP59 571 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 STOX2Q9P2F5 926 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 KLK8O60259 260 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 NOBOXO60393 691 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 ZNF806P0C7X5 589 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 NBL1P41271 181 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 NAGLUP54802 743 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 UBE2IP63279 158 aaKnown RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 GRB7Q14451 532 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 CDKL4Q5MAI5 379 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 AGTRAPQ6RW13 159 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 ARL14Q8N4G2 192 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 C2orf73Q8N5S3 287 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 KYQ8NBH2 561 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 PPFIBP2Q8ND30 876 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 PPP4R1Q8TF05 950 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 ZNF480Q8WV37 535 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 LCN9Q8WX39 176 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 FBXL8Q96CD0 374 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 MOCOSQ96EN8 888 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 TMEM237Q96Q45 408 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 NRTNQ99748 197 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 KCNH6Q9H252 994 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 XKR8Q9H6D3 395 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 KIR3DX1Q9H7L2 352 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 NLGN3Q9NZ94 848 aa16.97■□□□□ 0.31
PHGDH-230ENST00000641927 PTBP2Q9UKA9 531 aaKnown RBP16.97■□□□□ 0.31
PHGDH-230ENST00000641927 LRRC14BA6NHZ5 514 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 STX16-NPEPL1H3BU86 382 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 STX16O14662 325 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 TAPBPO15533 448 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 CCNT2O60583 730 aaKnown RBP16.96■□□□□ 0.31
PHGDH-230ENST00000641927 SUPT7LO94864 414 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 IMPDH1P20839 514 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 IMPA1P29218 277 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 MDH1P40925 334 aaKnown RBP16.96■□□□□ 0.31
PHGDH-230ENST00000641927 GDF5P43026 501 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 HERVK_113P63132 956 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 GPR18Q14330 331 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 C14orf28Q4W4Y0 310 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 KANSL1Q7Z3B3 1105 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 ZNF761Q86XN6 746 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-230ENST00000641927 ARL10Q8N8L6 244 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 LMNTD1Q8N9Z9 388 aa16.96■□□□□ 0.31
PHGDH-230ENST00000641927 AVL9Q8NBF6 648 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms