RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	MCOLN1	Q9GZU1	580 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	SHARPIN	Q9H0F6	387 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	OR51M1	Q9H341	326 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	PNPLA8	Q9NP80	782 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	ABCB10	Q9NRK6	738 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	DNAJC11	Q9NVH1	559 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	VPS28	Q9UK41	221 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	FBXO10	Q9UK96	956 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	FBXO5	Q9UKT4	447 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	PCDHB5	Q9Y5E4	795 aa		7.82	□□□□□ -1.16
RTTN-223	ENST00000640931	SCN10A	Q9Y5Y9	1956 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PDCD11	Q14690	1871 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	EXOC1L	A0A1B0GW35	172 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	C2orf71	A6NGG8	1288 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	POM121C	A8CG34	1229 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931		I6L893	689 aa	Predicted RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931		M0QZ92	97 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	SYN3	O14994	580 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PRPSAP2	O60256	369 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	DFNA5	O60443	496 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	TNFRSF21	O75509	655 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	IPO13	O94829	963 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	TMEM63A	O94886	807 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PROC	P04070	461 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	SLC2A4	P14672	509 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	NELFE	P18615	380 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	ADRA1D	P25100	572 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	ATP5C1	P36542	298 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PGD	P52209	483 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	NKX3-2	P78367	333 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	SP3	Q02447	781 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	SLC18A2	Q05940	514 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PUDP	Q08623	228 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	IFRD2	Q12894	506 aa	Predicted RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	SGCG	Q13326	291 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	CAMK1	Q14012	370 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PDK2	Q15119	407 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	TAZ	Q16635	292 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	DUSP6	Q16828	381 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	HSD17B12	Q53GQ0	312 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	NHSL2	Q5HYW2	709 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	SDHAF4	Q5VUM1	108 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	ARHGAP17	Q68EM7	881 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PKN3	Q6P5Z2	889 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	LRFN4	Q6PJG9	635 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	ZNF773	Q6PK81	442 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	ZNF782	Q6ZMW2	699 aa	Predicted RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	CLEC20A	Q6ZU45	233 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	FRMD7	Q6ZUT3	714 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	USP45	Q70EL2	814 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	RRM2B	Q7LG56	351 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	SNX20	Q7Z614	316 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	METTL23	Q86XA0	190 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	ZNF280B	Q86YH2	543 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	MFSD2A	Q8NA29	543 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	AVL9	Q8NBF6	648 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	LPCAT1	Q8NF37	534 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	LINC01599	Q8WXQ3	324 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	CPT1B	Q92523	772 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	7.81	□□□□□ -1.16	3e-8	■■■■■ 70.6
RTTN-223	ENST00000640931	DUS3L	Q96G46	650 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	VPS39	Q96JC1	886 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	HSFY1	Q96LI6	401 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	PPP1R36	Q96LQ0	422 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	CSF3R	Q99062	836 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	CEP41	Q9BYV8	373 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	RHBG	Q9H310	441 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	DHX35	Q9H5Z1	703 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	COQ10B	Q9H8M1	238 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	ZFP14	Q9HCL3	533 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	CD320	Q9NPF0	282 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	MTMR10	Q9NXD2	777 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	THUMPD1	Q9NXG2	353 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	CTSF	Q9UBX1	484 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	MAGED2	Q9UNF1	606 aa	Predicted RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	NDUFAF1	Q9Y375	327 aa		7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	LAMA2	P24043	3122 aa	Known RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	TNRC18	O15417	2968 aa	Predicted RBP	7.81	□□□□□ -1.16
RTTN-223	ENST00000640931	FAM237B	A0A1B0GVD1	139 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	CCDC182	A6NF36	153 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	TRABD2B	A6NFA1	517 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	UBXN8	O00124	270 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	KIAA0355	O15063	1070 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SGCE	O43556	437 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	BPNT1	O95861	308 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	EDN3	P14138	238 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	PRF1	P14222	555 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	POU3F3	P20264	500 aa	Predicted RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	RAB4A	P20338	218 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	WARS	P23381	471 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	SDC4	P31431	198 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	CRHR1	P34998	444 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	ETV5	P41161	510 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	RPS5	P46782	204 aa	Known RBP	7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	NME5	P56597	212 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	CDC42EP1	Q00587	391 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	FAAP100	Q0VG06	881 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	RAPSN	Q13702	412 aa		7.8	□□□□□ -1.16
RTTN-223	ENST00000640931	EFR3A	Q14156	821 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms