RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 DNASE1L3Q13609 305 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 THOC5Q13769 683 aaKnown RBP17.11■□□□□ 0.33
PTPN11-207ENST00000639857 LONRF1Q17RB8 773 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 ZNF470Q6ECI4 717 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 FBXO38Q6PIJ6 1188 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 CENPUQ71F23 418 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 OR2L8Q8NGY9 312 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 GABPB2Q8TAK5 448 aaPredicted RBP17.11■□□□□ 0.33
PTPN11-207ENST00000639857 RAD51AP1Q96B01 352 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 SIGLEC10Q96LC7 697 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 FOPNLQ96NB1 174 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 NAT9Q9BTE0 207 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 KLHL42Q9P2K6 505 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 RNF14Q9UBS8 474 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 SAR1BQ9Y6B6 198 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 COMMD10Q9Y6G5 202 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 SEC16AO15027 2179 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 FASNP49327 2511 aaKnown RBP17.1■□□□□ 0.33
PTPN11-207ENST00000639857 PIEZO2Q9H5I5 2752 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 PCM1Q15154 2024 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 TMEM150CB9EJG8 249 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 GOLGA8TH3BQL2 631 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 CCDC188H7C350 402 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 TTC4O95801 387 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 S1PR4O95977 384 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 KLK3P07288 261 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-207ENST00000639857 HBQ1P09105 142 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 PKMP14618 531 aaKnown RBP17.1■□□□□ 0.33
PTPN11-207ENST00000639857 PGAM1P18669 254 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 CD9P21926 228 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 FMO4P31512 558 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 CCR10P46092 362 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 COL9A2Q14055 689 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-207ENST00000639857 KCTD19Q17RG1 926 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-207ENST00000639857 ZNF789Q5FWF6 425 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 CREG2Q8IUH2 290 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 HMGCLL1Q8TB92 370 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 CT55Q8WUE5 264 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 NRTNQ99748 197 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 DPH2Q9BQC3 489 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-207ENST00000639857 FAM167BQ9BTA0 163 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 SEMA4CQ9C0C4 833 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 GEMIN8Q9NWZ8 242 aaKnown RBP17.1■□□□□ 0.33
PTPN11-207ENST00000639857 SPHK1Q9NYA1 384 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 MAD1L1Q9Y6D9 718 aa17.1■□□□□ 0.33
PTPN11-207ENST00000639857 ISM1B1AKI9 464 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 E5RI56 91 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 E7EQ34 232 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 NKX2-8O15522 239 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 NIPSNAP2O75323 286 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 MATN4O95460 622 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 NTRK1P04629 796 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 PVRP15151 417 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 CYP2A7P20853 494 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 F8A1P23610 371 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 ITGA1P56199 1179 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 ABRQ12979 859 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 GRB7Q14451 532 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 TTLL9Q3SXZ7 439 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 IZUMO3Q5VZ72 239 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 CDHR3Q6ZTQ4 885 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 NEK10Q6ZWH5 1172 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 AGGF1Q8N302 714 aaeCLIP17.09■□□□□ 0.33
PTPN11-207ENST00000639857 ZBTB2Q8N680 514 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 EXD3Q8N9H8 876 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 LINC01555Q8NAE3 123 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPN11-207ENST00000639857 OR1L3Q8NH93 324 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 CFAP61Q8NHU2 1237 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 KCNJ9Q92806 393 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 INTS7Q9NVH2 962 aaKnown RBP17.09■□□□□ 0.33
PTPN11-207ENST00000639857 SPATA7Q9P0W8 599 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 SLC39A10Q9ULF5 831 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 PLAGL1Q9UM63 463 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 CRYL1Q9Y2S2 319 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 AP1M2Q9Y6Q5 423 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 FAM169AQ9Y6X4 670 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 FER1L5A0AVI2 2057 aa17.09■□□□□ 0.33
PTPN11-207ENST00000639857 CREG1O75629 220 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 C1orf105O95561 183 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 CHRM3P20309 590 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 OAS2P29728 719 aaKnown RBP17.08■□□□□ 0.32
PTPN11-207ENST00000639857 PEBP1P30086 187 aaKnown RBP17.08■□□□□ 0.32
PTPN11-207ENST00000639857 RORAP35398 523 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 PTGIRP43119 386 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 RPS15P62841 145 aaKnown RBP17.08■□□□□ 0.32
PTPN11-207ENST00000639857 GPS2Q13227 327 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 MORF4L2Q15014 288 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 GPR135Q8IZ08 494 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 DSELQ8IZU8 1212 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 SKA2Q8WVK7 121 aaPredicted RBP17.08■□□□□ 0.32
PTPN11-207ENST00000639857 N4BP2L2Q92802 583 aaPredicted RBP17.08■□□□□ 0.32
PTPN11-207ENST00000639857 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.32
PTPN11-207ENST00000639857 CCDC68Q9H2F9 335 aa17.08■□□□□ 0.32
PTPN11-207ENST00000639857 ACTR5Q9H9F9 607 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms