RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SPHK1Q9NYA1 384 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 MARCH4Q9P2E8 410 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 CRLS1Q9UJA2 301 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 POMT2Q9UKY4 750 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ACSL5Q9ULC5 683 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ICKQ9UPZ9 632 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 BTRCQ9Y297 605 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 PCDHGA6Q9Y5G7 932 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 KRT87PA6NCN2 255 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TLCD2A6NGC4 264 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 SLC9B1P1A6NJY1 282 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 IQCF5A8MTL0 148 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TP73O15350 636 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 CNOT3O75175 753 aaKnown RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 ZNF189O75820 626 aaPredicted RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 DNAJB5O75953 348 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TTC4O95801 387 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 GOT2P00505 430 aaKnown RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 VCLP18206 1134 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ITGALP20701 1170 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 PRDX3P30048 256 aaKnown RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 CCR7P32248 378 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 HALP42357 657 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 PPM1FP49593 454 aaPredicted RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 VPS41P49754 854 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 CACNG1Q06432 222 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 GPS1Q13098 491 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 PRKG2Q13237 762 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 KCNAB2Q13303 367 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TUBB3Q13509 450 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 DNASE1L3Q13609 305 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 SLC29A2Q14542 456 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 PRPSAP1Q14558 356 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 SKIDA1Q1XH10 827 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 KRT71Q3SY84 523 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 GPR33Q49SQ1 333 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ZRANB3Q5FWF4 1079 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 C16orf46Q6P387 395 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ARHGEF18Q6ZSZ5 1173 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 CDHR3Q6ZTQ4 885 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TRIM73Q86UV7 250 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 CCDC25Q86WR0 208 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 PPP1R3BQ86XI6 285 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 FAM20CQ8IXL6 584 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 AGGF1Q8N302 714 aaeCLIP7.6□□□□□ -1.19
PNKP-229ENST00000637897 ESX1Q8N693 406 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 OR5AR1Q8NGP9 310 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ADAMTS17Q8TE56 1095 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ZFPM2Q8WW38 1151 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 HDAC10Q969S8 669 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ULK4Q96C45 1275 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 PGM2Q96G03 612 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ABHD17AQ96GS6 310 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TRAPPC9Q96Q05 1148 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TRIM56Q9BRZ2 755 aaKnown RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 CCM2Q9BSQ5 444 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ZCCHC2Q9C0B9 1178 aaKnown RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 ZMYND15Q9H091 742 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 EPN3Q9H201 632 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 EPB41L4BQ9H329 900 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 TFB2MQ9H5Q4 396 aaKnown RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 LRRC40Q9H9A6 602 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ZNF71Q9NQZ8 489 aaPredicted RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 TREX1Q9NSU2 369 aa7.6□□□□□ -1.19
PNKP-229ENST00000637897 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 USP9XQ93008 2570 aaPredicted RBP7.6□□□□□ -1.19
PNKP-229ENST00000637897 SHANK1Q9Y566 2161 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
PNKP-229ENST00000637897 EIF3HO15372 352 aaKnown RBP eCLIP7.59□□□□□ -1.19
PNKP-229ENST00000637897 GPC4O75487 556 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 WISP1O95388 367 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 IFNB1P01574 187 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 F7P08709 466 aaPredicted RBP7.59□□□□□ -1.19
PNKP-229ENST00000637897 ITGAXP20702 1163 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 HADHAP40939 763 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 GCGRP47871 477 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 CD151P48509 253 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 LMAN1P49257 510 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 GYS2P54840 703 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 YBX1P67809 324 aaKnown RBP7.59□□□□□ -1.19
PNKP-229ENST00000637897 CRADDP78560 199 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 HSD11B2P80365 405 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 SEPT6Q14141 434 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 ERV3-1Q14264 604 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 TSTD2Q5T7W7 516 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 CPZQ66K79 652 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 FAM198BQ6UWH4 519 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 PACS1Q6VY07 963 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 UNC5AQ6ZN44 842 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 ZNF771Q7L3S4 317 aaPredicted RBP7.59□□□□□ -1.19
PNKP-229ENST00000637897 PRICKLE2Q7Z3G6 844 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 KMT5CQ86Y97 462 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 RASGRP3Q8IV61 690 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 PPIL6Q8IXY8 311 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 LINC01555Q8NAE3 123 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 ZSCAN1Q8NBB4 408 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 SIDT2Q8NBJ9 832 aaKnown RBP7.59□□□□□ -1.19
PNKP-229ENST00000637897 ACVR1CQ8NER5 493 aa7.59□□□□□ -1.19
PNKP-229ENST00000637897 OR2W6PQ8NHA6 318 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms