RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 LPGAT1Q92604 370 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 CLIP3Q96DZ5 547 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 CAPZA3Q96KX2 299 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 OR2A14Q96R47 310 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 FAM117AQ9C073 453 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 SPHK1Q9NYA1 384 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 CDYLQ9Y232 598 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 CRYL1Q9Y2S2 319 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 MRFAP1Q9Y605 127 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 ZNF462Q96JM2 2506 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 A0A0J9YY10 115 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 E5RI56 91 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 E7EQ34 232 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 ESR1P03372 595 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 TPBGLP0DKB5 382 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 OAS2P29728 719 aaKnown RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 PKLRP30613 574 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 ITGA1P56199 1179 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 POLE2P56282 527 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 NFATC3Q12968 1075 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 KYNUQ16719 465 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 CRTC2Q53ET0 693 aaPredicted RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 CTSL3PQ5NE16 218 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 FAM199XQ6PEV8 388 aaPredicted RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 PCGF5Q86SE9 256 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 CILP2Q8IUL8 1156 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 NAT8LQ8N9F0 302 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 OR1L3Q8NH93 324 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 SLC22A18Q96BI1 424 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 FAM136AQ96C01 138 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 TCTN2Q96GX1 697 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 BIRC8Q96P09 236 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 TRIM56Q9BRZ2 755 aaKnown RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 TWSG1Q9GZX9 223 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 DDX47Q9H0S4 455 aaKnown RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 CCDC68Q9H2F9 335 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 ADNPQ9H2P0 1102 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 ACTR5Q9H9F9 607 aaPredicted RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 IRAK4Q9NWZ3 460 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 IL1RAPL1Q9NZN1 696 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 CIDEBQ9UHD4 219 aa13.34□□□□□ -0.27
PNKP-228ENST00000637325 TSR3Q9UJK0 312 aaKnown RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 HEMK1Q9Y5R4 338 aaPredicted RBP13.34□□□□□ -0.27
PNKP-228ENST00000637325 CDC14CA4D256 554 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 B8ZZF3 427 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 NIPSNAP2O75323 286 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 CREG1O75629 220 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 USP1O94782 785 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 HBQ1P09105 142 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 MSL3P1P0C860 447 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 PKMP14618 531 aaKnown RBP13.33□□□□□ -0.28
PNKP-228ENST00000637325 GPS2Q13227 327 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 LONRF1Q17RB8 773 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 SLC5A12Q1EHB4 618 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 ATP1A1-AS1Q5TC04 95 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 PRAMEF17Q5VTA0 474 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 ZNF470Q6ECI4 717 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 CNSTQ6PJW8 725 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 CDHR3Q6ZTQ4 885 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 CENPUQ71F23 418 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 TAX1BP1Q86VP1 789 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 GPR135Q8IZ08 494 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 CALML6Q8TD86 181 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 MAGEC3Q8TD91 643 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 RAD51AP1Q96B01 352 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 PDLIM2Q96JY6 352 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 LRFN5Q96NI6 719 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 IL17FQ96PD4 163 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 NAPGQ99747 312 aaPredicted RBP13.33□□□□□ -0.28
PNKP-228ENST00000637325 RAB11FIP5Q9BXF6 653 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 C20orf96Q9NUD7 363 aaPredicted RBP13.33□□□□□ -0.28
PNKP-228ENST00000637325 INTS7Q9NVH2 962 aaKnown RBP13.33□□□□□ -0.28
PNKP-228ENST00000637325 INTS10Q9NVR2 710 aaKnown RBP13.33□□□□□ -0.28
PNKP-228ENST00000637325 GEMIN8Q9NWZ8 242 aaKnown RBP13.33□□□□□ -0.28
PNKP-228ENST00000637325 PCDHGA6Q9Y5G7 932 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 CFAP46Q8IYW2 2715 aa13.33□□□□□ -0.28
PNKP-228ENST00000637325 MEN1O00255 615 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 DNALI1O14645 258 aaPredicted RBP13.32□□□□□ -0.28
PNKP-228ENST00000637325 TERTO14746 1132 aaKnown RBP13.32□□□□□ -0.28
PNKP-228ENST00000637325 RASGRF2O14827 1237 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 CD9P21926 228 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 PTPN4P29074 926 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 PEBP1P30086 187 aaKnown RBP13.32□□□□□ -0.28
PNKP-228ENST00000637325 CCNFP41002 786 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 BDKRB1P46663 353 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 ADARP55265 1226 aaKnown RBP13.32□□□□□ -0.28
PNKP-228ENST00000637325 KCNAB2Q13303 367 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 PTK6Q13882 451 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 RNASEH2BQ5TBB1 312 aaKnown RBP13.32□□□□□ -0.28
PNKP-228ENST00000637325 IZUMO3Q5VZ72 239 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 TMEM135Q86UB9 458 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 KLHL7Q8IXQ5 586 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 DSELQ8IZU8 1212 aa13.32□□□□□ -0.28
PNKP-228ENST00000637325 ZBTB2Q8N680 514 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms